4E1R


Conserved Protein Domain Family
Lsr2

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pfam11774: Lsr2 (This model is not part of the current CDD release)
Lsr2 dimerization domain
Lsr2 is a small, basic DNA-bridging protein present in Mycobacterium and related actinomycetes. It is a functional homologue of the H-NS-like proteins. H-NS proteins play a role in nucleoid organisation and also function as a pleiotropic regulator of gene expression. This entry represents the dimerization domain found at the N-terminal of Lsr2. Lsr2 dimers show a self-associative propensity allowing chromosome compaction and gene regulation in response to external stress.
Statistics
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PSSM-Id: 519877
Aligned: 105 rows
Threshold Bit Score: 44.4101
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4E1R_A        26 MAKKVTVTLVDDFDGSgAADE----TVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRV 83  Mycobacterium tuberculosis
WP_011727381   1 MGKIVTIDYIDDLDGV-PIDEkdvdTVEFSYRGEDYTLVLTTKNGAQFNKDIARYIKAAKKA 61  Mycolicibacterium smegmatis
WP_038550531   1 MARREVTQFFDDLDNT-PLTAdevnVVEFSYKGSTYVLDLSEENAQKFADTIEPYIAAGTKV 61  Corynebacterium glyciniphilum
WP_025253836   1 MARREVTQIFDDLDNS-PLEEkdvrVIRFSVNGTDYVLDVSEKNAAAFHAQLAPYINAARKV 61  Corynebacterium vitaeruminis
WP_012730789   1 MARRYVPQIFDDLDGT-ELTEsdatEIHFSVDGTAYMLEVSEDNARKFHEALEPFISSATKE 61  Corynebacterium
WP_015402078   1 MARREITQYFDDLDNT-PITEeqvhVVRFSVDGNDYILDLSEKNAREFREILEPFVQAARPA 61  Corynebacterium halotolerans
Q4JY49         1 MARREITQFFDDLDNA-PLSEnevnVVDFSVNGIDYTLDLSAKNREAFEKALEPYIQVARRR 61  Corynebacterium jeikeium K411
WP_025401821   1 MARREVTQYFDDLDNT-TLNEeevrVVDFSVNGVDYTLDLSEDNKAKFEEALAPYIQVARRK 61  Corynebacterium falsenii
WP_012359384   1 MARKEITQYFDDIDNA-PLAAegvnVVEFAVDGVTYSMDVSTANREKFEEALAPYIAVARRV 61  Corynebacterium urealyticum
WP_013887892   1 MARREVTQYFDDLDNT-PLAEdevlVVDFSVDGVDYTLDLSKKNADKFEAALQPFIEVARRk 61  Corynebacterium resistens
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