Conserved Protein Domain Family
EpuA
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pfam11772: EpuA (This model is not part of the current CDD release)
DNA-directed RNA polymerase subunit beta
This short 60-residue long bacterial family is the beta subunit of the DNA-directed RNA polymerase, likely to be EC:2.7.7.6. It is membrane-bound and is referred to by the name EpuA.
Links
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Statistics
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PSSM-Id: 519876
Aligned: 25 rows
Threshold Bit Score: 42.9336
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_015010755 46 LIVIFLLAVFALIIGMIIGYTVLGDgTDALEVLSFDFWKRVLDMIRG 92  Amphibacillus xylanus
Q8DT58       15 VVLIALLCLIFLAIGLMIGYSFIGEgRNPLSILFWDKWQSIIDKFTG 61  Streptococcus mutans
Q8E068       16 IVLVILLALLFLAVGLMLGYSVFGDgEHAYSILSLDKWQNIIGKFLG 62  Streptococcus agalactiae serogroup V
2_pfamImport  1 LLLVALLACLFLAIGLMVGYSVIGDgQHASSILSIDKWTDLIHKFTG 47 
Q5M440       15 VLIVCLISLASLAIGLMIGYSVLGEgKDPISILKPESWQAIIAKFTG 61  Streptococcus thermophilus LMG 18311
WP_015075693 17 VLIVIVVIILTFLIGAMIGFGLLGD-GNPFAVFSQNTWERIFSFFTK 62  Carnobacterium maltaromaticum
4_pfamImport  1 ILTVIALVIILYVIGTMIGYSLIGS-GNSKDIFNEGTWTHIFDFIKK 46 
Q831A9       14 ILVVISLVIILFVVGTMIGYGLIGN-GNPMDVFDEKIWTHIMNFFk- 58  Enterococcus faecalis
3_pfamImport  1 ILIVILLAILLFLAGTMIGYGVIGD-GSPFKVFSPSLWNHIFEFM-- 44 
WP_234771534 14 VLSVIALAVVLFFVGLMIGYGGIGD-GSPLHVFNRALWQHIFEFVqf 59  Tetragenococcus halophilus
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