3EEQ


Conserved Protein Domain Family
CbiG_N

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pfam11760: CbiG_N (This model is not part of the current CDD release)
Cobalamin synthesis G N-terminal
Members of this family are involved in cobalamin synthesis. The gene from Synechocystis sp has been designated cbiH but in fact represents a fusion between cbiH and cbiG. As other multi-functional proteins involved in cobalamin biosynthesis catalyze adjacent steps in the pathway, including CysG, CobL (CbiET), CobIJ and CobA-HemD, it is therefore possible that CbiG catalyzes a reaction step adjacent to CbiH. In the anaerobic pathway such a step could be the formation of a gamma lactone, which is thought to help to mediate the anaerobic ring contraction process. Within the cobalamin synthesis pathway CbiG catalyzes the both the opening of the lactone ring and the extrusion of the two-carbon fragment of cobalt-precorrin-5A from C-20 and its associated methyl group (deacylation) to give cobalt-precorrin-5B. The N-terminal of the enzyme is conserved in this family, and the C-terminal and the mid-sections are conserved independently in other families, CbiG_C and CbiG_mid, although the distinct function of each region is unclear.
Statistics
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PSSM-Id: 519869
Aligned: 264 rows
Threshold Bit Score: 57.0091
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3EEQ_A            48 IETIWKCYDAIVFVMALEGATRIVCKYAKSKTEDPAIVCIDDKINYVIPLLGGH-WGANDIARELSVILNSTPIITTA 124 Saccharolobus...
wustl:cce_0926    68 LATIWSKNQAFVFCLATGAVIRLIAPLLNNKASDPAIIVIDPLGQYVISLCSGHqGGADHLAQLIAHHLDATPIITGA 145
WP_012596848      58 LSTIWSQNKAFIFCLATGAVVRLIAPLLRDKSHDPAIIIIDQKGEFVISLCSGHqGKADQLTQLIAHLINAKPIITGA 135 Rippkaea orie...
WP_012953871      58 LTDIFPKNRALIFCLSAGAVIRLITPLLRNKAYDPSIIVVDPKGRFVISLCGGHqGRANKLTQLIASYLNAEPVITGV 135 Candidatus At...
WP_015218798      59 LVNIWSNSKCIVFCLTLGAVTRLIAPLLTNKKTDPAIIVIDPAFEYIICLTGEHqHQGDKLTEILAELLSAKAIITSA 136 Cyanobacteriu...
jgi:Cyast_1997    59 LENIWQDSKAIIFSLTMGAVVRLVSSLLGNKKDDPAIIVIDPDGNYVISLLGGHqAFADKLTELVALQLDAQPIVTSA 136
jgi:PCC7424_0379  67 LPILWNTHKTLIFCLATGAVVRLIAPLLENKAEDPAILVIDQKGKFVISLCSGHqGGADRLTQLIATGLDAIPIITGA 144
WP_013324368      59 LATLWKTQRTLIFCLATGAVVRLIAPLLEDKSTDPAIIVIDQTGKWVISLCSGHtGGADRLAELIATELDATPIITGA 136 Gloeothece ve...
Q2JP97            61 VAQTWPQVQGCLFILAAGSVVRLIAPLLQDKQRDPAVVVVDEAGRWAISLCGGHvGGADALARQVAATLGAQPVLTSA 138 Synechococcus...
jgi:Pse7367_2810  49 IAQAWSKYDGLVFCMAVGAVVRLIAPYLQDKTTDPAVVVIDDRGKFAISLCGGHlGGGDRLVTEISARLDAQAIITTA 126
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