Conserved Protein Domain Family
Activator-TraM

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pfam11657: Activator-TraM 
Transcriptional activator TraM
TraM is required for quorum dependence. It binds to and in-activates TraR which controls the replication of the tumour-inducing virulence plasmid. TraM interacts in a two-step process with DNA-TraR to form a large, stable anti-activation complex.
Statistics
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PSSM-Id: 492006
Aligned: 3 rows
Threshold Bit Score: 201.389
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014708281   2 SDKIEETIKEIAAKHGIAVGRDDPILILQTINDRLMQESTAAQQANLDAFKSELEEIAHRWGDDAKNKAERTLNAALAAS 81  Methylophaga fr...
Q5NWI4         2 SDKIESIIKEIAAKHGIAVGRDDPILVLQTINERLMQDSAVAQQETLDRFKEELESIAQRWGEDAKSKAERTLNAALTAS 81  Aromatoleum aro...
WP_014133167   3 TDKIEETIKEIAVKHGIAVGRDDPILILQTINERLMQDSAAAQQEILDHFKEELEAIAHRWSDDAKNKAERTLNAALTAS 82  Methylotuvimicr...
WP_014708281  82 KEAMAATIKENAKATAAAARQQVEEAIAQeLKPSIREARRVSYMNLVAAGMVVFAAGLALWAS 144 Methylophaga frappieri
Q5NWI4        82 KETMMKGMQEGTKAAAESARCEVEAAVGR-LAGSVRASQRIAIMNMIAGALAVFAAAMALLST 143 Aromatoleum aromaticum EbN1
WP_014133167  83 RETMTQTMQEGAKSAAELIRREIKAASAQ-FAAPIHEAKRVALMNLVAAGMTIIAAGLVLWAA 144 Methylotuvimicrobium alcaliphilum
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