2OST


Conserved Protein Domain Family
PDDEXK_5
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pfam11645: PDDEXK_5 (This model is not part of the current CDD release)
PD-(D/E)XK endonuclease
This family of endonucleases includes a group I intron-encoded endonuclease. This family belongs to the PD-(D/E)XK superfamily.
Links
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Statistics
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PSSM-Id: 491998
Aligned: 14 rows
Threshold Bit Score: 154.851
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2OST_D         3 STKLKGDIAQQAAIMRALKMGWGVLKPLGDRLSYDLVFDVEGILLKVQVKSSWKSEKtgNYVVDNRRTRTNRRNIVRSPY 82  Synechocystis s...
WP_082687235   2 QSHRKGDLTEAIAIAEVKRRGIPVSVPFGDNERYDLILESEAGLYRVQVKTGTFDGE--TVRFKGYSIHTNSEGNVHNAY 79  Halobacterium h...
WP_017749489   2 DTKLKGDIAEQAAILHALKRGWGVLKPVGDRLPYDLAFDVQGNLIKIQVKNAWFDEPsgNYVVDNRRTKTNRRLMLRDVY 81  Scytonema hofma...
WP_045054052   2 DTKLRGDIAEQAAVLHALKRGWGVLKPVGDRLAYDLVFDVYEVLIKIQVKYAWWDEPssNYIVDNRRTKTNRRLMIREGY 81  Aliterella atla...
WP_023172601   2 DTKLRGDVAEQAAILQALNHELGVLRPIGDRLPYDLVFDVSGTLFKIQVKCAWLDLSsgNYVVDNRRTKTNRRVMLREAY 81  Gloeobacter kil...
WP_010832055  37 HTKDKGDLGTAKAHADLVGLGFTVLFPATEHAAFDLVAYRDGTFHRVQVKYR--SARsgTISVQFRSVWADRNGTHMKPS 114 Nocardioides sp...
WP_036396434   5 HTKDKGDLGVAKAHADLVAKGFDVLFPATEHAPFDLVAHSDGIFHRIQVKYR--SAPsgVVSVNLRSTWSDRHGVHSTPI 82  Mycolicibacteri...
WP_019512141   5 HTKDKGDLGVAKAFSDLVAKGYTMLFPATEHAAFDLVAYRAGVFVRVQVKYR--CARagVIKLNLRSTWADRHGVHSVPI 82  Mycobacteriaceae
WP_015319532   2 NTKQIGDETEAKIMAALIAEGYTVSIPFGDNESYDLVLDTGTTLERVQCKTGWIEDD--VVRFKTASKTTSDGDVVRADY 79  Natronococcus o...
WP_015299786   2 NTKQVGDITEVRILAQLVAAGYSVSIPYGDNDPYDLLVDTGSSVLKVQCKTGWVEDD--VIRFKTASKTTRDGSVTMVDY 79  Halovivax ruber

2OST_D        83 RGNDFDFAVAYVEELELFYVFPVDVFIs-yGSEIHLVETDKRQRKpRSFGYREAWHLI 139 Synechocystis sp. PCC 6803
WP_082687235  80 D-GDVDYFLVYCHDLETMYLV-AEEAV---TSNMRLRVEDPEVEQ-PSINWAADYEFD 131 Halobacterium hubeiense
WP_017749489  82 NPSDFDFALVYIESLDLFYVFPVEVFIs-yGSEIHFVETDKRQRKpRSAKYRDAWKLM 138 Scytonema hofmannii
WP_045054052  82 KQSDFEFALAYIEQLDLFYVFPVDIFIg-yGSEIHLVEATKRQRKtRSANYRDAWGLI 138 Aliterella atlantica
WP_023172601  82 RVSDFDFALAYIQPIDLFYVFPVHIFId-yGSEIHLVEADKRQRKpLSATYRDAWHLI 138 Gloeobacter kilaueensis
WP_010832055 115 DKAEVDVLCIYCPQTDSCYY----LRPtdfRRSVTLRLVPSKNGQqRGVLPIAAFRAF 168 Nocardioides sp. CF8
WP_036396434  83 DKNSVDTICIYCPETDQCYY----LRPadhNASVTLRITPVKNGQqKRILNAADHREL 136 Mycolicibacterium cosmeticum
WP_019512141  83 DKGAVDVICIYCPDTDECYY----IRPsdhGVSVNLRIAAPRNGQqKRILAAAAFRDL 136 Mycobacteriaceae
WP_015319532  80 G-DEIDAFAVRCRETEQLYWVPSEDAG---AKSTYLRIAEPEISH-PSVNRAEEYRLK 132 Natronococcus occultus
WP_015299786  80 D-DSIDAFAVYCDGQSEFYWMPVDEAG---SKSTYLRLTEPEIDH-PRVNRASKFTFS 132 Halovivax ruber
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