2OST


Conserved Protein Domain Family
PDDEXK_5

?
pfam11645: PDDEXK_5 
PD-(D/E)XK endonuclease
This family of endonucleases includes a group I intron-encoded endonuclease. This family belongs to the PD-(D/E)XK superfamily.
Statistics
?
PSSM-Id: 491998
Aligned: 15 rows
Threshold Bit Score: 154.851
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2OST_A         3 STKLKGDIAQQAAIMRALKMGWGVLKPLGDRLSYDLVFDVEGILLKVQVKSSWKSEKtgNYVVDNRRTRTNRRNIVRSPY 82  Synechocystis s...
WP_082687235   2 QSHRKGDLTEAIAIAEVKRRGIPVSVPFGDNERYDLILESEAGLYRVQVKTGTFDGE--TVRFKGYSIHTNSEGNVHNAY 79  Halobacterium h...
WP_017749489   2 DTKLKGDIAEQAAILHALKRGWGVLKPVGDRLPYDLAFDVQGNLIKIQVKNAWFDEPsgNYVVDNRRTKTNRRLMLRDVY 81  Scytonema hofma...
WP_045054052   2 DTKLRGDIAEQAAVLHALKRGWGVLKPVGDRLAYDLVFDVYEVLIKIQVKYAWWDEPssNYIVDNRRTKTNRRLMIREGY 81  Aliterella atla...
WP_023172601   2 DTKLRGDVAEQAAILQALNHELGVLRPIGDRLPYDLVFDVSGTLFKIQVKCAWLDLSsgNYVVDNRRTKTNRRVMLREAY 81  Gloeobacter kil...
WP_010832055  37 HTKDKGDLGTAKAHADLVGLGFTVLFPATEHAAFDLVAYRDGTFHRVQVKYR--SARsgTISVQFRSVWADRNGTHMKPS 114 Nocardioides sp...
WP_036396434   5 HTKDKGDLGVAKAHADLVAKGFDVLFPATEHAPFDLVAHSDGIFHRIQVKYR--SAPsgVVSVNLRSTWSDRHGVHSTPI 82  Mycolicibacteri...
WP_019512141   5 HTKDKGDLGVAKAFSDLVAKGYTMLFPATEHAAFDLVAYRAGVFVRVQVKYR--CARagVIKLNLRSTWADRHGVHSVPI 82  Mycobacteriaceae
KHD09225      10 NPKKIGEKTEAKIISCLIDNDKVVLIPFGDNQRYDLVIDEDGVFQRIQCKTG--RLKdgAISFQTCSSSYHRNGKR-HSY 86 
WP_004267311   6 NTKQTGDETECKIMCRLLEKGYTVSQPFGDNDKYDLILDTGTDLFRVQCKTGWQEDDgaVLRFKTASKTTRNGEVTVVDY 85  Natrialba magadii
2OST_A        83 RGNDFDFAVAYVEELELFYVFPVDVFIs-yGSEIHLVETDKRQRKpRSFGYREAWHLI 139 Synechocystis sp. PCC 6803
WP_082687235  80 D-GDVDYFLVYCHDLETMYLV-AEEAV---TSNMRLRVEDPEVEQ-PSINWAADYEFD 131 Halobacterium hubeiense
WP_017749489  82 NPSDFDFALVYIESLDLFYVFPVEVFIs-yGSEIHFVETDKRQRKpRSAKYRDAWKLM 138 Scytonema hofmannii
WP_045054052  82 KQSDFEFALAYIEQLDLFYVFPVDIFIg-yGSEIHLVEATKRQRKtRSANYRDAWGLI 138 Aliterella atlantica
WP_023172601  82 RVSDFDFALAYIQPIDLFYVFPVHIFId-yGSEIHLVEADKRQRKpLSATYRDAWHLI 138 Gloeobacter kilaueensis
WP_010832055 115 DKAEVDVLCIYCPQTDSCYY----LRPtdfRRSVTLRLVPSKNGQqRGVLPIAAFRAF 168 Nocardioides sp. CF8
WP_036396434  83 DKNSVDTICIYCPETDQCYY----LRPadhNASVTLRITPVKNGQqKRILNAADHREL 136 Mycolicibacterium cosmeticum
WP_019512141  83 DKGAVDVICIYCPDTDECYY----IRPsdhGVSVNLRIAAPRNGQqKRILAAAAFRDL 136 Mycobacteriaceae
KHD09225      87 R-GEIDYFGVYCPENRKCYLVPVEEVG---TTFAKIRVMPAANGQeKNINWATDYEMP 140
WP_004267311  86 G-NSVDAFAVRCVETDTLYWVPAEQVG---SKSTYLRLEGPEIDH-PHVRLASAFHFD 138 Natrialba magadii
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap