2JOB


Conserved Protein Domain Family
Anti-LPS-SCYG

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pfam11630: Anti-LPS-SCYG 
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Anti-lipopolysaccharide factor/Scygonadin
Anti-lipopolysaccharide factor binds to bacterial LPS and may specifically inhibit the LPS-mediated activation of the hemolymph coagulation. It has a strong antibacterial effect, especially on the growth of Gram-negative bacteria. This entry also includes the antibacterial protein Scygonadin, which has antibacterial activity against the Gram-positive bacterium Micrococcus luteus.
Statistics
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PSSM-Id: 152066
Aligned: 11 rows
Threshold Bit Score: 135.584
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2JOB_A     5 QGWEAV-AAAVASKIVGL--WRNEKTELLGHECKFTVKPYLKRFQVYYKGRMWCPGWT---AIRGEASTRSQSGVAGKTA 78 
Q1XI22    26 QGWEAL-VPAIAEKLTGL--WENGELELLGHYCNFYVEPKFRNWQLRFKGRMWCPGWT---IIKGEADTRSRSGVVGKTI 99  Penaeus japonicus
A0A1E4    26 QGWQAV-AAAVASKIVGL--WRNEETELLGHKCRFTVKPYIKRLQLHYKGKMWCPGWT---PITGEARTRSHSGVAGRTA 99  white shrimp
Q2TJP7    26 QGWEAV-AAAVAVKIVGL--WRNEKTELLGHECKFTVKPYIKRFQLYYKGRMWCPGWT---AIRGEAKTRSRSGVAGRTA 99  Penaeus chinensis
ABG82027  26 GWLDRI-IGTAVDSVAEF-----GTTNIVDQICNTRVMPTIKKFELYFRGRVWCPGWT---TIQGESLTRSRTRVVNKAV 96 
A1YV58    26 QALNKL-MPKIVSAIIYMigQPNAGVTFLGHQCLVE---STRQPDGFYTAKMWCTSWTsdnPIVGEGRSRVELEALKGSI 101 giant mud crab
Q9BP36     4 GIWTQL-ALALVKNLATL--WQSGDFQFLGHECHYRVNPTVKRLKWKYKGKFWCPSWT---SITGRATKSSRSGAVEHSV 77  Tachypleus tridentatus
ABP73291  23 QGVQDL-LPALVEKIAGL--WHSDEVEFLGHSCRYSQRPSFYRWELYFNGRMWCPGWA---PFTGRSRTRSPSGAIEHAT 96 
ABQ12866  23 QVPPEV-VSLIISKLVNL--WSDGQVEFMGHTCNYSYSPTISKFQLYYKGKMWCPGWA---PFSGNSKTKSRAGSIEHAT 96 
ABP96982  27 Q-YEAL-VASILGKLSGL--WHSDTVDFMGHTCHIRRRPKFRKFKLYHEGKFWCPGWT---HLEGNSRTKSRSGSARDAI 99 
Q4U5R2    27 FSLKDLfVPVIKDQVSDL--WRTGDIDLVGHSCTYNVKPDIQGFELYFIGSVTCPGWT---TLRGESNTRSKSGVVNSAV 101 blue shrimp
2JOB_A    79 KDFVRKAFQKGLISQQEANQWLS 101
Q1XI22   100 QDFVKKAFSQGLITEEEARAWLS 122 Penaeus japonicus
A0A1E4   100 RDFVQKAFERGLISEQDAKRWLS 122 white shrimp
Q2TJP7   100 KDFVRKAFQQGLISQQQANQWLN 122 Penaeus chinensis
ABG82027  97 EDFARKAVAAGLMTQEDANPLLN 119
A1YV58   102 RNFVQTASDYKKFTIEEVEDWIA 124 giant mud crab
Q9BP36    78 RDFVGQAKSSGLITEKEAQTFIS 100 Tachypleus tridentatus
ABP73291  97 RDFVQKALQSNLITEEDARIWLE 119
ABQ12866  97 RDFVTKAIDQKLITAEQASAWIK 119
ABP96982 100 KDFVYKALQNKLITENNAAAWLK 122
Q4U5R2   102 KDFIQKALKAGLVTEEEAKPHLV 124 blue shrimp
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