2JOB


Conserved Protein Domain Family
Anti-LPS-SCYG

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pfam11630: Anti-LPS-SCYG (This model is not part of the current CDD release)
Anti-lipopolysaccharide factor/Scygonadin
Anti-lipopolysaccharide factor binds to bacterial LPS and may specifically inhibit the LPS-mediated activation of the hemolymph coagulation. It has a strong antibacterial effect, especially on the growth of Gram-negative bacteria. This entry also includes the antibacterial protein Scygonadin, which has antibacterial activity against the Gram-positive bacterium Micrococcus luteus.
Statistics
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PSSM-Id: 519812
Aligned: 11 rows
Threshold Bit Score: 135.584
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2JOB_A         5 QGWEAV-AAAVASKIVGL--WRNEKTELLGHECKFTVKPYLKRFQVYYKGRMWCPGWT---AIRGEASTRSQSGVAGKTA 78  black tiger shrimp
Q1XI22        26 QGWEAL-VPAIAEKLTGL--WENGELELLGHYCNFYVEPKFRNWQLRFKGRMWCPGWT---IIKGEADTRSRSGVVGKTI 99  Penaeus japonicus
A0A1E4        26 QGWQAV-AAAVASKIVGL--WRNEETELLGHKCRFTVKPYIKRLQLHYKGKMWCPGWT---PITGEARTRSHSGVAGRTA 99  white shrimp
Q2TJP7        26 QGWEAV-AAAVAVKIVGL--WRNEKTELLGHECKFTVKPYIKRFQLYYKGRMWCPGWT---AIRGEAKTRSRSGVAGRTA 99  Penaeus chinensis
XP_050727498  26 GWLDRI-IGTAVDSVAEF-----GTTNIVDQICNTRVMPTIKKFELYFRGRVWCPGWT---TIQGESLTRSRTRVVNKAV 96 
A1YV58        26 QALNKL-MPKIVSAIIYMigQPNAGVTFLGHQCLVE---STRQPDGFYTAKMWCTSWTsdnPIVGEGRSRVELEALKGSI 101 giant mud crab
Q9BP36         4 GIWTQL-ALALVKNLATL--WQSGDFQFLGHECHYRVNPTVKRLKWKYKGKFWCPSWT---SITGRATKSSRSGAVEHSV 77  Tachypleus trid...
ABP73291      23 QGVQDL-LPALVEKIAGL--WHSDEVEFLGHSCRYSQRPSFYRWELYFNGRMWCPGWA---PFTGRSRTRSPSGAIEHAT 96 
ABQ12866      23 QVPPEV-VSLIISKLVNL--WSDGQVEFMGHTCNYSYSPTISKFQLYYKGKMWCPGWA---PFSGNSKTKSRAGSIEHAT 96 
ABP96981      27 Q-YEAL-VASILGKLSGL--WHSDTVDFMGHTCHIRRRPKFRKFKLYHEGKFWCPGWT---HLEGNSRTKSRSGSARDAI 99 
Q4U5R2        27 FSLKDLfVPVIKDQVSDL--WRTGDIDLVGHSCTYNVKPDIQGFELYFIGSVTCPGWT---TLRGESNTRSKSGVVNSAV 101 blue shrimp
2JOB_A        79 KDFVRKAFQKGLISQQEANQWLS 101 black tiger shrimp
Q1XI22       100 QDFVKKAFSQGLITEEEARAWLS 122 Penaeus japonicus
A0A1E4       100 RDFVQKAFERGLISEQDAKRWLS 122 white shrimp
Q2TJP7       100 KDFVRKAFQQGLISQQQANQWLN 122 Penaeus chinensis
XP_050727498  97 EDFARKAVAAGLMTQEDANPLLN 119
A1YV58       102 RNFVQTASDYKKFTIEEVEDWIA 124 giant mud crab
Q9BP36        78 RDFVGQAKSSGLITEKEAQTFIS 100 Tachypleus tridentatus
ABP73291      97 RDFVQKALQSNLITEEDARIWLE 119
ABQ12866      97 RDFVTKAIDQKLITAEQASAWIK 119
ABP96981     100 KDFVYKALQNKLITENNAAAWLK 122
Q4U5R2       102 KDFIQKALKAGLVTEEEAKPHLV 124 blue shrimp
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