2JUO


Conserved Protein Domain Family
GABP-alpha

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pfam11620: GABP-alpha (This model is not part of the current CDD release)
GA-binding protein alpha chain
This family of proteins represents the transcription factor GABP alpha. This alpha domain is a five-stranded beta-sheet crossed by a distorted helix termed an OST domain. The surface of the GABP alpha OST domain contains two clusters of negatively-charged residues suggesting there are positively-charged partner proteins. The OST domain binds to the CH1 and CH3 domains of the co-activator histone acetyltransferase CBP/p300, a direct link between GABP and transcriptional machinery has been made.
Statistics
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PSSM-Id: 519805
Aligned: 11 rows
Threshold Bit Score: 98.1744
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2JUO_A         6 SQAIDINEPIGNLKKLL-EPRL-QCSLDAHEICLQDIQ-LDPDRSLFDQGVKTDGT-VQ---LSVQVISYQgMEP-KLNI 77  house mouse
EEC09200       3 AQHMDITEPLTSLKSLL-EQRL-AVSLHDYAFFLQDTQeLNASKNLVDQCVQGEGL-VQ---VNVEIINKD-GVR-KINI 74 
XP_049530132  47 MVHMDLRESLSKLRSLI-EERT-GIVLADYKFYLQDTTlLESHKNLVDQCVQGEGL-VQ---INVQVKP---SRR-RINI 116
XP_002428175  76 IEHMDIQCPLYTLRNIL-QKRF-NIDLSEYTFWLQDAQmLEPHKNLVDQCVQGEGL-VQ---INVEIKIEG-DSK-KINI 147
XP_011134976  77 MQHMEIREPLSTLRSLL-ESKL-QIDLSDYSFWLQDAQmLESDKTLAAQCIEGQGV-VQ---VSVQIKITKdNER-RINI 149
XP_009014716 173 VQCMDITEPLSTLRRLL-EERF-VADYSAYELWLQDSVqLDPSKNLVSQCLEGTGT-VQ---INVEFKV---GYP-RINI 242
XP_015792889  61 LEGIELNASVKTLCQLL---KVkYEDIESYDFYLQDNK-LTFNKSIIEQCNLVEGArQQtklINIKLIVELeSR--RVTI 134
Q4H3F7        27 VQNIDIKTPIKVLKDVL-SRRLrKSDLSKHDIYLQDFY-LDPDLSLFEQGVKIHGS-VE---LSIQVQSSSt-NP-KLII 98  vase tunicate
XP_031815093  39 SQAIDINEPIGNLKKLL-ERRL-QCSLDAHEICLQDIQ-LDPDRSLFDQGVKTDGT-VQ---LSVQVISYQgIEP-KLNI 110
Q9I9E8        39 TQDIDINEPIGNLKKLL-EPRL-QIPLDGYDICLQDIQ-LHPDHSLFDQGVKTDGT-VQ---LSVQIVTKPg-EE-KLNI 109 zebrafish
XP_009025754 140 IQQLDLSQPLWYIRDLLvSDGIiDGNVKKVEYWLQNNDkLDESKSLKWCCVEMEGEnIQ---VNIDVRARLdNKKiRINI 216
2JUO_A        78 LEIVKTAET 86  house mouse
EEC09200      75 VDVLKPAEE 83 
XP_049530132 117 ADVLKPTDE 125
XP_002428175 148 IDVLKPTDE 156
XP_011134976 150 VDVLKPAEN 158
XP_009014716 243 LDVLKPVED 251
XP_015792889 135 LDILKPPDN 143
Q4H3F7        99 VEIVKPMQD 107 vase tunicate
XP_031815093 111 LEIVKPAET 119
Q9I9E8       110 LEIVKPVET 118 zebrafish
XP_009025754 217 SDILVPCDE 225
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