Conserved Protein Domain Family
AviRa

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pfam11599: AviRa 
RRNA methyltransferase AviRa
This family of proteins represents the methyltransferase AviRa from Streptomyces viridochromogenes. This protein mediates the resistance to the antibiotic avilamycin. AviRa methylates a specific guanine base within the peptidyl-transferase loop of the 23S ribosomal RNA.
Statistics
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PSSM-Id: 491970
Aligned: 11 rows
Threshold Bit Score: 294.614
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
KPI02802       1 MPYRHATERSDGSDFASGFVLHSAPNHPAFPVRLATELFLRALEHLPTptgPGSGpgVTLWDPCCGSGHLATVLGWCHRR 80 
2_pfamImport   1 MKYHYEIEKKDYRDFASGRVLYNVPGSAPFPVRLASEIFYRAQSFLNE---EKNG--FKLYDPCCGSGYLLTVLGFLHAS 75 
WP_038483368   1 MQFTYETIKRDFSDFSSGRVLYNAPGSTGFPIRLTSEIFQISRSYLQK---PSQ---LNVYDPCCGGAHLLTGIGFLHGG 74  Shouchella lehe...
WP_042430283   1 MQFLYETEAGDYRDFASGRVLRNAPGTTAFPVRLTSEILFRCRALIGK---KTE---LTIYDPCCGGAHMLTAAGFLHGR 74  Geomicrobium sp...
GAK08195       7 MNYKYETENKDYRDFASGRVLLNAKKTTAFPIRMASEIMQHCIASLEK---KES---LTLYDPCCGGAHLLTAMGFIHGK 80 
1_pfamImport   1 MKFKFETLKKDYSDFSSDKVLVNAPRTPAFPVRIASEIMARCLSFLKS---TDH---LTIYDPCCGGAHLLTVLGFIYST 74 
WP_012200180   1 MEYKY-TKNDNYEDFASGRVLYHVGGEPTFPVRLALEIYERCLQYSIK---KAE---ISLYDCCCGGAYMLSILGLLKSN 73  Lachnoclostridi...
WP_012890755   1 M-YRHATVRGDYEDLASGAVLHSAPGFPAFPVRLASEAFQRALALR------GGGgpATVWDPCCGSGYLLTVIGLLHRG 73  Streptosporangi...
3_pfamImport   1 MGYRYAVERTDHSALAGGHVLRSAPGFPGFPVRLASELFQRAMVHT-------GGepVRLWDPCCGSGYLATVLGLLHRD 73 
WP_015254437   1 MEYRFATDEPR-GHFASGRVLYNAKGAAPFPVRLADEIVQRCFHYLEE---RGHSgpYAIYDPCCGSGYLLTVIGLLHGA 76  Thermobacillus ...
WP_023962280   1 MEYLYESVQRSYEDYASGRVLYNAHGTTSFPVRLASEIAQRCFHILEQ---KGAGgpYSLYDPCCGGAYLLTVLGLMHGQ 77  Paenibacillus s...
KPI02802      81 TIGRVVASDVDGETLSLARKNLRLLSPEGLLDRERERLELSVRFDKPAY-AEAARAAHRLAGRLa-eDGGALPWSAGRAD 158
2_pfamImport  76 KIREIAASDDDEKMVAFARKNLSLLSFAGLRRREEEIRKYVKEYGKPSH-IEALDSVQVLKAYL---KKEPIQITCFQRD 151
WP_038483368  75 SIQTLYGSDSNETIIETGQSNLRLLTYEGLAQRKRKLEKDYLLFNKSAH-AEALKSVDRLKSYLd-kTGEVKG-EIFQFN 151 Shouchella lehe...
WP_042430283  75 SITTIVGSDVNSSVVPIAKSNVSLLTREGLEDRKQQLQAFFDEFQKSAH-REALESIERLEQLQq-kAGPFHSLQAFDHD 152 Geomicrobium sp...
GAK08195      81 AIKAIYGSDFDRDVIEVATTNLSLLTDDGLIKRENQLSSLFNTYGKESH-KEALESVGRLRSMSa--QMTSPIISSFTWD 157
1_pfamImport  75 NLTKIYGTDIDKSALTYAQKNLNLLTDETLNQKIKTLQSVNKSQEEQTQsAEVLHSAKRLAALLldtKAPQKEVQCFPWD 154
WP_012200180  74 TIANLYGSDINSESIQLANDNLGLLTKSGINKRRDELKALYQTYKKASH-IDALHSIDRIEELL----TREIKTYLFKGN 148 Lachnoclostridi...
WP_012890755  74 RIQALLASDVSDDALRLARANLDLLGQAGLSARAGVLREKAERFAKPSY-AAAAEAAGRIGRMLa-aGGGDVPHDVRRAD 151 Streptosporangi...
3_pfamImport  74 LLTGVRATDVDADAVALAARNLRLLTAEGLAEREEELRRSARDFGRVAF-VERAEAARDLAAGLa-aQGGDLPHEAAVAD 151
WP_015254437  77 QIRAVFASDIDESMLETARRNLSLLTAEGMRARIEQLRELYEQYGKPSH-AEALESAAMLDGYRa--CGTVESIEMFPAD 153 Thermobacillus ...
WP_023962280  78 RFSSVIGSDVNPEVLAIANKNLSLLTHQGLDHRIGQLQELFERYHKPSH-QEALQSAARLKVLLd--RSRLEDASCYPAD 154 Paenibacillus s...
KPI02802     159 VF---DPASLSallasaglrgaaPDVVVMDVPYGERTHWGGQa---pERPVPALLRSLAAVL-PPHAVIAVADRARKIPV 231
2_pfamImport 152 ITkpdENPVQR------------VQVIITDLPYGNLVSWRGNd----ENPVQSLFENLWKAMdLNNSVAVIITGQKIKPE 215
WP_038483368 152 IAskdVPKLEE------------IHIVMTDLPYGELVSWDTNv----LSPVKQMLQNVYSVL-AHDGVVAVVSDKFTLIE 214 Shouchella lehe...
WP_042430283 153 ITtspPSVEG-------------VNIIIADLPYGNTVDWQTTe----DEPLHQMLQNIYETLdPDQSVVALISDKKQQTE 215 Geomicrobium sp...
GAK08195     158 ITggpPPVNEK------------VDIVITDIPYGNTVGWQTTs----SDPVQDLLGHLELIMnKEDSIIAIVSEKKETIT 221
1_pfamImport 155 ITe-gPPFFKK------------VNIVITDLPYGNMAHWQGDi---rEQPAKLLLDHIYQTLdLNNSVVAIICNKNERIA 218
WP_012200180 149 VLevcDLPFT-------------PDIIITDVPYGNMVEWEEGs----G-GINQMMNALS-AVcGSDTIICVCMDKKQKIH 209 Lachnoclostridi...
WP_012890755 152 VF---DPGQLAeaaa-----gyaPDIVVTDVPYGEQTTWQGPg---gDSGVPGMLAALAPVL-TERAVVVVTARGRKVPL 219 Streptosporangi...
3_pfamImport 152 VFsleEGVE--------------ADLVVTDVPYGEMTRWEGNvpggaGEPMRGLLASLGRVL-PEHAVVVVTARTRRVSL 216
WP_015254437 154 ITvgsPEAVRDsgf-------cpVNIVIADLPYGHLTGWQSGs----ADPAARMLDSLFPLLrPGASVIALISDKSHKLR 222 Thermobacillus ...
WP_023962280 155 ITdsqSQAALNrp--------agIHMVITDLPYGDIVSWHGGs----GEPVREFFEQIHPMLdPGHSVVAVIADKGQKLR 222 Paenibacillus s...
KPI02802     232 AP-LRPLERLRIGTR 245
2_pfamImport 216 HEgFNRVHHFKVGKR 230
WP_038483368 215 HPlFRRLKVLKHGKR 229 Shouchella lehensis
WP_042430283 216 HRyYERVKALKHGKR 230 Geomicrobium sp. JCM 19039
GAK08195     222 HDrFEKVKTMKHGKR 236
1_pfamImport 219 HQnFIQVNRLKHGKR 233
WP_012200180 210 NDiFQRLERQLVGKR 224 Lachnoclostridium phytofermentans
WP_012890755 220 GGrIRARESFKVGTR 234 Streptosporangium roseum
3_pfamImport 217 PEgVRALERVKVGNR 231
WP_015254437 223 HErYRRIALLKAGKR 237 Thermobacillus composti
WP_023962280 223 HDrFKRLQQFKAGKR 237 Paenibacillus sp. JCM 10914
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