6SWG


Conserved Protein Domain Family
Lge1

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pfam11488: Lge1 (This model is not part of the current CDD release)
Transcriptional regulatory protein LGE1
This family of proteins is conserved from fungi to human. In yeasts it is involved in the ubiquitination of histones H2A and H2B. This ubiquitination step is a vital one in the regulation of the transcriptional activity of RNA polymerase II. In S. cerevisiae, Rad6 and Bre1 are present in a complex, also containing Lge1, that is required for H2B ubiquitination. Bre1 is the H2B ubiquitin ligase that interacts with acidic activators, such as Gal4, and recruits Rad6 and its binding partner Lge1 to target promoters. In S. pombe the equivalent protein to Lge1 appears to be Shf1. In human, periphilin acts a transcriptional co-repressor and regulates cell cycle progression.
Statistics
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PSSM-Id: 519732
Aligned: 38 rows
Threshold Bit Score: 60.3471
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6SWG_A        18 QSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEigercvEELKHFI 87  human
NP_001102462 327 DSQLSSRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEigercvEELKHFI 396
ELW48705     115 DGQLTNRSKAIGLKTKEREQAYQQGCETFGMVVKILIEKDSSLEKPIQFALRQNLHEmgerciEELKHFI 184
ELK02220     329 DGRLSSRYKAIAAKTKMIEQVYQQDCETFAMVVKMLVEKDPSLEKPIQFALRQNLYEmgqrcvEELKHFI 398
XP_008109312 296 DTQRVRRAKAIAAKTTEIEQVYKQDCETFGAVVKMLIEKDPSLEKSIQFSLRQNLHEigerciEELKHFI 365
XP_005993234 282 ESKADHRSAVIAAKTKEIEQVYKQDCETFGMVVKMLIDKDPSLEKPIQFALKENLNDigdrciEELKRFI 351
XP_007579001 270 ENLEERRTMAIAAKAKEIEKVYRQDCETFGMVVKMLVAKDPSLEKQLQVPLRENLGEirerclEDLKHFI 339
XP_015459981 260 E---AHRAHVIANKALEIEKLYRQDCETFGMVVKMLVAKQPTLEKQLETALKENLVEikerclEDLRQFI 326
XP_015194481 277 DDFQERRAIAIAEKAREIEQVYRQDCKTFGMVVKMLVAKDPTLEKQLQTPLKENLIEirerclEDLQQFI 346
XP_003496748 339 DQLT-NRLKAIASKTKEIEQAYHQDCETFGMVVKMLVDKDPSLEKSIQFALRQNLHEisercvKELRQFI 407
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