Conserved Protein Domain Family
N36

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pfam11438: N36 
36-mer N-terminal peptide of the N protein (N36)
The arginine-rich motif of the N protein is involved in transcriptional antitermination of phage lambda. N36 forms a complex with boxB RNA by binding tightly to the major groove of the boxB hairpin via hydrophobic and electrostatic interactions forming a bent alpha helix.
Statistics
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PSSM-Id: 288317
Aligned: 2 rows
Threshold Bit Score: 59.954
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P03045   2 DAQTRRRERRAEKQAQWKAANPLLVGVSAKPVNRP 36  Escherichia phage Lambda
P03045   2 DAQTRRRERRAEKQAQWKAANPLLVGVSAKPVNRP 36  Escherichia phage Lambda
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