3U1W,4FR9,3ELG,3DUE,3DB7


Conserved Protein Domain Family
PepSY_like

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pfam11396: PepSY_like 
Click on image for an interactive view with Cn3D
Putative beta-lactamase-inhibitor-like, PepSY-like
This family of bacterial proteins is probably periplasmic. Members are found predominantly in microbes of the human gut and oral cavity. Structurally, one member of this family is found to show similarity to the beta-lactamase-inhibitor PepSY proteins, so the overall function may be inhibitory. There are tandem repeats of the domain on many family members.
Statistics
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PSSM-Id: 402831
View PSSM: pfam11396
Aligned: 30 rows
Threshold Bit Score: 64.5789
Threshold Setting Gi: 81769416
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3U1W_B         34 NYYVVDFNNGgseTTAWFTDQGIWXXEK----IDISFAQ--LPAAVSTAFKQSfYSNwtvDDTYAINRLNxgIVYKIEAE 107 Parabacteroide...
jgi:Coch_0344  58 eEYTVIFRDG---LEIEFNGDGDWKELKar-hGKVPDHV--VPEKILAHVRAT-FPF---ESIKEVSRNLskKKYEAELT 127 Capnocytophaga...
Q5LG07         61 KKYDVLLTNA---TEIDFDNRGNWIEVDck-kAAVPATI--VPDFVKEYMKANgYHS---EFVTQIERDR--KGYEVELN 129 Bacteroides fr...
Q89YQ5         61 AKYEVLLTDG---TEIDFDSKGNWEEVSaskgHAVPASV--VPSFAVSYLKEHnFT----EPVTKVERDR--KGYEVELS 129 Bacteroides th...
Q7MWB3         60 KTYDVVFTNG---NKIEFDKKGNWKEIDck-ySRVPSDL--VPAPILRHISSQ-YPD---LYIVQIDRDS--RDYEVELN 127 Porphyromonas ...
Q5LIE1         70 llYRVVFPNE---VKVEFSENGGWKRLMip-dQKLPGSLdsLWGKIIEYVQQL-FPD---DPFIGIENAC--YGDCVLLS 139 Bacteroides fr...
3DUE_A         42 KSYDVIFTNG---DKLEFDKKGIWTEVNck-ySAVPVAV--VPDAIKKYVATN-YPD---AKXLKIERDK--HDYEVKLS 109 Bacteroides vu...
Q5LBR8         60 KSYDVIFTDG---NKVEFDKKGNWTEVNck-fSVVPQGI--IPSPIQKYTATN-YPD---AKVLKIERDK--TDYEVKLS 127 Bacteroides fr...
3DB7_A         42 KSYEVIFTNG---NKVEFDKKGNWEEVDck-hTSVPVAI--IPAAIQKYVTTN-YPD---AKVLKIERDK--KDYEVKLS 109 Bacteroides th...
WP_005833165   60 KSYDVVFTNG---EKVEFDKSGEWKEVRcr-qSEVPAQI--VPEAIRNYVKTN-YPD---ARILQIEYDD--NEYEIKLS 127 Bacteroides
3U1W_B        108 QsnsEVDLYYSQYGNLIK 125 Parabacteroides distasonis ATCC 8503
jgi:Coch_0344 128 D---DQELKFDDKFNFIg 142 Capnocytophaga ochracea DSM 7271
Q5LG07        130 T---DLSLKFTKDGKFRk 144 Bacteroides fragilis NCTC 9343
Q89YQ5        130 T---GVSFKFDKKGKFLK 144 Bacteroides thetaiotaomicron
Q7MWB3        128 N---GLELVFSLKGVFKR 142 Porphyromonas gingivalis
Q5LIE1        140 S---GKKIAFYYDGTCIg 154 Bacteroides fragilis NCTC 9343
3DUE_A        110 N---GWEIKFDXQFNVID 124 Bacteroides vulgatus ATCC 8482
Q5LBR8        128 N---GWELKFDSKFNLId 142 Bacteroides fragilis NCTC 9343
3DB7_A        110 N---RTELKFDLKFNLID 124 Bacteroides thetaiotaomicron
WP_005833165  128 N---RWEITFDSKMRVId 142 Bacteroides
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