Conserved Protein Domain Family
T4BSS_DotI_IcmL

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pfam11393: T4BSS_DotI_IcmL (This model is not part of the current CDD release)
Type-IV b secretion system, inner-membrane complex component
IcmL contains two amphipathic beta-sheet regions, required for the pore-forming ability which may be related to the transfer of this protein into a host cell membrane. The icmL gene shows significant similarity to plasmid genes involved in conjugation however IcmL is thought to be required for macrophage killing. It is unknown whether conjugation plays a role in macrophage killing. This is a family of DotI/IcmL proteins of type IVb secretion systems, that reside in the inner-membrane. It carries a single transmembrane helix in the N-terminal conserved region, has an extra-periplasmic domain, and is conserved in all T4BSSs including I-type conjugation systems (TraM). DotI/IcmL (and DotJ) may form an inner membrane complex that associates with the core complex.
Statistics
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PSSM-Id: 491846
Aligned: 7 rows
Threshold Bit Score: 238.452
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5HXS3        26 LIAFSGsliLNVILGLALTVSVMKTPHVRYIYHDSLGKPRELIVTDQPYFSDSEVINWAARKVTNLYTMDFVSYAKHLDA 105 Gluconobacter o...
Q83B84        29 LLFALI---INCGLAFMIFYKWMYPPQPEYFATTADGRIIMLHPLSDPVLPDDFVLQWSTDAVRKAFSLDYEHWREQLQE 105 Coxiella burnetii
Q83B83        27 LLASVV---ITVSLLAVLSYQIITTPKPAYYATTTTGRVIPLQSLDMPVVTNTYLLQWAALATRAVYNLDFENYTKQLDN 103 Coxiella burnetii
Q88BS5        50 LVLSVS---VNGYLGWQVAH-----PPVKYFAAE-GGRVTKIIPTDKPGHSRRDVSAFGADTIRQSFTLDFVHYRDQMTQ 120 Pseudomonas syr...
WP_014448811  63 LLASVL---LNGAMGWALVHK-----SPVYFAATNDGRILPLVPLSHPAASDRAVVSWATNVATAAYSYDFVNWRSALSG 134 Leptospirillum ...
WP_014103954  79 LIQGIV---IVGLIGAMFFVVHTHQPENRYFATTEDGRLVPMVPLNAPNLSAPALMSWVAQAATEVMTFGFSDYRRRLQE 155 Micavibrio aeru...
WP_012383004  26 IMLVMGmfvMQAIFVIHDVYVWMNPPQNKFFIVDGKGPPHLATPLSSPVRGDREMLAWTVDSILGVYNLNYHDYPVQLTT 105 Beijerinckia in...
Q5HXS3       106 SAKDFDLPAWNAWAQSFSGPGNIDFIKAKRVFLTATPKSAPSIRSEGKTRsGDYEWHVSFPMLLKWE-NASGSTTNLLSV 184 Gluconobacter o...
Q83B84       106 ASNNFTPDGWKWFLNSLKSTNNLKTLVDLKMVSNATVTGAPTVVRKEVVG-GHFAWNIKMPLLVTYT-SEGHTINMPMEV 183 Coxiella burnetii
Q83B83       104 ASSYFTPTGWESLTNAMKSSGAIDSLKNNKLFMAGIVNGPAVILDQEVVH-GRYSWRVQLPLLVTYT-SASIQQKAHFII 181 Coxiella burnetii
Q88BS5       121 LGERYSEVGFQDYYKALVASNLLKAVKDQRMNL-WVDVGPGVIRGSGTIG-DKFAWEYQYPVTLKLDgQQSGSPPQRFIF 198 Pseudomonas syr...
WP_014448811 135 LSPEFTKEGFASFIGSLKASGNLKLVSDNRMVASAVPTEAGVILAKGLLK-GVYVWKIQVPILVTYQ-AAKSSVSQNLLV 212 Leptospirillum ...
WP_014103954 156 ASRNFTRRGWESFTQALQRSRIIESVEEYQQVITAAPKGAPILVSEGLVN-GRYQWQVQLPMILTYQ-AGSKTRSDTWLV 233 Micavibrio aeru...
WP_012383004 106 AGRRFTQKGWISWADSYKKSGNFDTMKQAMLLCDAQAQRAAIIRESTMLQ-DALAYRIEVPIVQTCR-NSQQTSSQNMLL 183 Beijerinckia in...
Q5HXS3       185 DVTIRRTNSPEHPDGLVITELNAPR 209 Gluconobacter oxydans
Q83B84       184 TLIVVRMPTQDYPQRIAINNFLAQT 208 Coxiella burnetii
Q83B83       182 TMDIIRVPVIDAAKSIQINRFSAVR 206 Coxiella burnetii
Q88BS5       199 TLRIQQTDVRVKNAGLEVTQVITTN 223 Pseudomonas syringae pv. tomato
WP_014448811 213 TLMVVRRSVLVHPKGLAVAQFLAKE 237 Leptospirillum ferrooxidans
WP_014103954 234 TMVIVRVSRLESANGVGIEQWIAQP 258 Micavibrio aeruginosavorus
WP_012383004 184 TALVVRTNSEDYPDGLAIEQLVARP 208 Beijerinckia indica
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