Conserved Protein Domain Family
DUF3140

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pfam11338: DUF3140 
Protein of unknown function (DUF3140)
Some members in this family of proteins are annotated as DNA binding proteins. No function is currently known.
Statistics
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PSSM-Id: 402785
View PSSM: pfam11338
Aligned: 76 rows
Threshold Bit Score: 78.4282
Threshold Setting Gi: 505815796
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_008099810                    11 EFNEYVNMTADELESWLKSDDSNSAGWPkddaegdGETVGHDSGRKIVEILQanpdKKEDEYTDDQVEHMRKVVAYCKRH 90  Colletotrichum graminicola M1.001...
AORICAS:Z0003134                11 EFHRVVNMTSRELADWLRTRSADDEDEAl------PDQAGTPTGRHVLGILG----KRRTDLTAEDERVMRSVVRRVVDE 80  Amycolatopsis keratiniphila...
mmlSJTU:SCATT_54340             15 EFHRVVNMTSQELSDWLRTRSADESGEAl------PDEAGTERGRRVLAILG----KRKRDVTGDDVETMRRVVDVVTTE 84  Streptomyces cattleya NRRL 8057 = DSM 46488...
CCH29936                        21 EFHRVVNMTSHELEDWLRTRSADEDAEEl------PDQAGTPTGQDVLRVLR----KRRTDLTTEDVRVMRRVVDRVQAQ 90  Saccharothrix espanaensis DSM 44229...
CHGC:AMES_7370                  13 EFHRVVNMTSRELEDWLRTRDAGPEAEPl------PDEAGPPTGHQVLGVLR----KRRSDVDDRDADVMRKVVDRVHSE 82  Amycolatopsis mediterranei S699...
jgi:Svir_27190                  11 EFHRVVNMTSRELSDWLRTQSATPEDEEy------PDQAGPHLGQRVLEILG----KRKTDLGDDDFNVMRRVIDRVYGQ 80  Saccharomonospora viridis DSM 43017...
Q5YTV7                          13 EFHRLVNMSSRQLGDWLRTEGAGPRSETe------PDHAGPELGRRILAVLG----KRRTDLSADDIEVMRRAVDEITAA 82  Nocardia farcinica...
Q47RI8                          17 RFHELVNMNGNELRSWLLTEASNPEGFTs-----hPSLNIDEEGRKIIHVLT----KRRTDLTDEDVDTMQTVVDEVSLL 87  Thermobifida fusca YX...
jgi:Strop_2157                  17 SFHERVNVPSEKLRQWLLTRGSGEETFGp-----dPDLGLPEPGRRILRVLT----KRKVDLTRDDIETMRDTIDEIENL 87  Salinispora tropica CNB-440...
KoreaUniversity:VAB18032_23040  17 DFHAEVNVPSEQLRQWLLTRGSGEEAFGp-----nPDLDLPEPGRQILAVLR----KRKVDLTPEDIEVMREAVDRIRDL 87  Verrucosispora maris AB-18-032...
XP_008099810                    91 L---AQeSKsnSeKStedvKKTKSYASLK 116 Colletotrichum graminicola M1.001
AORICAS:Z0003134                81 Rr--DDlEP----VA----GQAHWRHKLM 99  Amycolatopsis keratiniphila
mmlSJTU:SCATT_54340             85 Rr--QDlEP----TA----GQSNWRHRLM 103 Streptomyces cattleya NRRL 8057 = DSM 46488
CCH29936                        91 Rr--DDlEP----TA----GEAHWRHRLM 109 Saccharothrix espanaensis DSM 44229
CHGC:AMES_7370                  83 Rr--DDlEP----TA----GEAHWRHRLM 101 Amycolatopsis mediterranei S699
jgi:Svir_27190                  81 Rr--EDlEP----TA----GDTHWRHRLM 99  Saccharomonospora viridis DSM 43017
Q5YTV7                          83 RgaeDDgEP----RA----GSDEWRRRLM 103 Nocardia farcinica
Q47RI8                          88 L---QNpRP----------DDDEWRHALM 103 Thermobifida fusca YX
jgi:Strop_2157                  88 L---AAkPPrgN-------ADDRWRHALl 106 Salinispora tropica CNB-440
KoreaUniversity:VAB18032_23040  88 T---AArPSrgN-------ADDEWRHSLl 106 Verrucosispora maris AB-18-032
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