Conserved Protein Domain Family
DUF3140

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pfam11338: DUF3140 (This model is not part of the current CDD release)
Protein of unknown function (DUF3140)
Some members in this family of proteins are annotated as DNA binding proteins. No function is currently known.
Statistics
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PSSM-Id: 519680
Aligned: 70 rows
Threshold Bit Score: 79.2096
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_008099810   11 EFNEYVNMTADELESWLKSDDSNSAGWpkddaegdGETVGHDSGRKIVEILQanpdKKEDEYTDDQVEHMRKVVAYCKRH 90 
WP_013676163   12 EFHSVVNMTSKELRDWLRTDSAAPDSEt------ePDHAGTPTGREVLDILG----KRRSDLTADDARAMQRVVDRVHEQ 81  Pseudonocardia...
10_pfamImport   1 EFHRVVNMTSRELADWLRTRSADDEDEa------lPDQAGTPTGRHVLGILG----KRRTDLTAEDERVMRSVVRRVVDE 70 
7_pfamImport    1 EFHRVVNMTSQELSDWLRTRSADESGEa------lPDEAGTERGRRVLAILG----KRKRDVTGDDVETMRRVVDVVTTE 70 
CCH29936       21 EFHRVVNMTSHELEDWLRTRSADEDAEe------lPDQAGTPTGQDVLRVLR----KRRTDLTTEDVRVMRRVVDRVQAQ 90 
WP_013229238   13 EFHRVVNMTSRELEDWLRTRDAGPEAEp------lPDEAGPPTGHQVLGVLR----KRRSDVDDRDADVMRKVVDRVHSE 82  Amycolatopsis ...
2_pfamImport    1 EFHRVVNMTSRELSDWLRTQSATPEDEe------yPDQAGPHLGQRVLEILG----KRKTDLGDDDFNVMRRVIDRVYGQ 70 
Q5YTV7         13 EFHRLVNMSSRQLGDWLRTEGAGPRSEt------ePDHAGPELGRRILAVLG----KRRTDLSADDIEVMRRAVDEITAA 82  Nocardia farci...
WP_013155561   14 EFHAVVNMTGEQLREWLLTNASGEDAFrt-----ePGHTVSRRGEAVVNLLN----KRRVDVTESDVELMREVTEYVRGQ 84  Nocardiopsis
WP_011906038   17 SFHERVNVPSEKLRQWLLTRGSGEETFgp-----dPDLGLPEPGRRILRVLT----KRKVDLTRDDIETMRDTIDEIENL 87  Salinispora tr...
XP_008099810   91 L---AQeSKsnSeKStedvKKTKSYASLK 116
WP_013676163   82 Rr--DDlEP----TP----GQAGWRHRLM 100 Pseudonocardia dioxanivorans
10_pfamImport  71 Rr--DDlEP----VA----GQAHWRHKLM 89 
7_pfamImport   71 Rr--QDlEP----TA----GQSNWRHRLM 89 
CCH29936       91 Rr--DDlEP----TA----GEAHWRHRLM 109
WP_013229238   83 Rr--DDlEP----TA----GEAHWRHRLM 101 Amycolatopsis mediterranei
2_pfamImport   71 Rr--EDlEP----TA----GDTHWRHRLM 89 
Q5YTV7         83 RgaeDDgEP----RA----GSDEWRRRLM 103 Nocardia farcinica
WP_013155561   85 L---ADpHR----------EDARWRHRLM 100 Nocardiopsis
WP_011906038   88 L---AAkPPrgN-------ADDRWRHALl 106 Salinispora tropica
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