Conserved Protein Domain Family
Minor_capsid_2

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pfam11114: Minor_capsid_2 
Minor capsid protein
Most of the members of this family are annotated as being minor capsid proteins. The genomes carrying the genes usually have three similar proteins adjacent to each other, hence this one being named as No.2.
Statistics
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PSSM-Id: 431662
Aligned: 7 rows
Threshold Bit Score: 100.676
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CCX40789      13 KILRRYGLGEd-KAAQRFLAEDVERKCQPYVPMSAGSaa-----hMVNAARVTAD--------SIIYPGPYAHYQYVGeg 78 
Q8Y4Y6        11 KAKGSVKKAK--ERGQFALINQAAADIAPYVPFLEGD--------LSNQYVIMNDk-------EIMWTSIYARRLYNG-- 71  Listeria monocy...
WP_013774275  11 EVQQIAMMKNm-NRSEFALINQVHADMNLYVPKKEGH--------LRDDSYAQDM--------SIYYPLSYAKAQFYGgf 73  Melissococcus p...
3_pfamImport   8 GIKRKISSQNv-KRGQYAVANQAMADMDRFVPRKEGN--------LRTAVHVTSVg-------KILYEMPYAKRQFH--- 68 
1_pfamImport   9 GIKRKVSPQAl-AKGKLIMNNQVMMSMNPYVPYRDGA--------LRGSSRANSV--------GVTWSGPHARAQFYGga 71 
2_pfamImport   9 GAERKVSDANv-LRGKRALANQVLMDTDKYIPMKGGA--------LRASGQIAIDg------sAVSWNTVYARAQFYGtn 73 
CCZ35667      11 KPRAMAKIRAagNQGLTDVRDEIIDDINRYVPKSGGSpqnggggdLRRSAELHSDqqakdgnlKVRWDTPYAQYQHEGkv 90 
CCX40789      79 magrapkhyTGQPLTYQGAPMRGKQW-DKRmmADhGKEVEKDLEGYLKG 126
Q8Y4Y6        72 ---------INFNFTLTHHPLAGPKW-DQR--AK-VDKLESWIEVAQKA 107 Listeria monocytogenes
WP_013774275  74 tt----kngKEVHFTNYTTPGTGKRW-DLK--AK-ANHIRAWKQAFLKG 114 Melissococcus plutonius
3_pfamImport  69 -----------LNGTTYSTPGTGPRW-DLK--AK-GMYMDSWKKAFLRG 102
1_pfamImport  72 y-----nkyKSFKFKKYTTPGTGKRW-DKRalAN-ATIVKDWEKSLLRG 113
2_pfamImport  74 --------gI-VVFKKYTTPGTGKLWyDKSaeAN----VDKWKRVAAKG 109
CCZ35667      91 mhgtpktrtygpeqLKYTEPMARKEW-EQY--AE-RKHGADWSLAIEEA 135
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