Conserved Protein Domain Family
YlqD

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pfam11068: YlqD 
YlqD protein
The structure of a representative of this family has been solved (pdb:4dci) and found to form a tetrameric structure of prefoldin-like architecture with the beta-barrel core and helical coiled coil tentacles. This suggests that this family may act as molecular chaperones.
Statistics
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PSSM-Id: 491595
Aligned: 57 rows
Threshold Bit Score: 91.8302
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012166870   24 LLLNRPITIKAIVTPIWKDEAQQLLQSQVDQLDEQLAQLDTQVQQMVSELSQHTIQstggegrtiaetqnQIQGIQVQAE 103 Acaryochloris ...
jgi:Adeg_1414   8 ivVTRPVVIKVKLTPRYREMLLARLAHALELAERELKRVEAELGRLRIKG--------------------NAVTLAEALE 67 
WP_013841828    2 LKITRPVLVKVRVTDGYKKNLAQELQESIARLELELRQLELQARKL-EEMAKKNPG--------------GVQAALVQLE 66  Desulforamulus...
WP_011878376    2 LTITRPVMVKVRVTDQYKRMLAVEFQQKVTKLELELKQLEFQTGKL-MEIAKKNPS--------------AAEAALTQVE 66  Desulforamulus...
WP_006191833    4 IQVKVPCTVKAKLTEKLKKRIIDELEDSLQKVDLELQQMGIEEKRIVSEAAQQDIQ--------------RAQAARQHFA 69  Selenomonas sp...
4_pfamImport    1 V----PVVIKAKVTEDLKAKIIADMKRQVQAAELDFEQFQFNAKRALNEQAPAGPE--------------AVRGLQEQIE 62 
6_pfamImport    1 -TLRVPVAVKAKVTQALKDRILKGADQALSDIDREMQNLEFQAKRMMTEQAKIDAQ--------------GLISLRAKVE 65 
10_pfamImport   1 MQILVPVAVKSKLTEALKTTLLNEINTNLSRVEHDMAQLEFQANGRIAEQAKVNIQ--------------AASQLRASFE 66 
WP_022382030    4 MQILVPVAVKSKLTEQLKATLLAEIEQNLKRVDHDMSQLDFEANGKLAEQAKINVQ--------------AVAPLRAQYE 69  Dialister
9_pfamImport    1 -QVLIPVAVKSKLTEALKTTLLNQINQNIKSVENDMTQLEFEANAKLAEQAKINMQ--------------AVAPLRAQYD 65 
WP_012166870  104 KRKNELLQQKAQVLQQLEKVGTLELGEEVEQGQVDSYFYVKQGDHFIRKMQVEMVLRDGVIEEIR 168 Acaryochloris marina
jgi:Adeg_1414  68 NLRREKAAARDRLRQQYESVKNLPLGTELVQGRTESLVEVGVGDEASRLGPVEIVIEEGKIVAVR 132
WP_013841828   67 QEKQKRLDKRLELLDNIKEIGRLPNGSEVLQGKVESIVDVQVGDDWRKLMSAEVVIKDGRVVEIR 131 Desulforamulus ruminis
WP_011878376   67 QEKQKRLDTRLMLLDKIKDVGKLVNGSEVLQGKVESFVQVQVGDDWNQLMNAEIILEDGKVVEIR 131 Desulforamulus reducens
WP_006191833   70 IERQKRMDFKEQAQAKLEETKKLAIGAEIVQGTLERTAELKIGSNMRELMNVEVLVEDDKVVAIR 134 Selenomonas sputigena
4_pfamImport   63 YEKAQRGHALQELKDKLERAENLEIGSEVGHGTLERSVEITVGSDLEALMGAEIVVEDGKVV--- 124
6_pfamImport   66 EQKQRLAAAKAKAQHDREEAEQLTIGSEIRQGTLEQTVVVKVGDDLEKLMGTEILLEDGKIVSIR 130
10_pfamImport  67 AQKAQMQQVKEKLTNDKEHLEKLAIGAELNRAPINRLVTIHVGDDMNNIVGGEILVEDGKIIA-- 129
WP_022382030   70 AQKVQMQQMKDKFLADKDHLERLTIGAELNRAPMNRLVTIHIGDDMNELLGGEILVEDGKIVEFR 134 Dialister
9_pfamImport   66 AQKAQMIQVKDKLTADKEHLEKLTIGAELPRQPLNRLVTLHIGDDMNAVAGGEILVEDGKIIA-- 128
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