5CQ9


Conserved Protein Domain Family
SopD

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pfam11047: SopD 
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Salmonella outer protein D
SopD is a type III virulence effector protein whose structure consists of 38% alpha-helix and 26% beta-strand.
Statistics
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PSSM-Id: 287960
Aligned: 2 rows
Threshold Bit Score: 606.584
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5CQ9_A   1 MPVTLSFGNRHNYEINHSRLARLMSPDKEEALYMGVWDRFKDCFRTHKKQEVLEVLYTLIHGCERENQAELNVDITGMEK 80  Salmonella enterica s...
P40722   1 MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINK 80  Salmonella enterica s...
5CQ9_A  81 IHAFTQLKEYANPSQQDRFVMRFDMNQTQVLFEIDGKVIDKCNLHRLLNVSENCIFKVMEEDEEELFLKICIKYGEKISR 160 Salmonella enterica s...
P40722  81 IYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTW 160 Salmonella enterica s...
5CQ9_A 161 YPELLEGFANKLKDAVNEDDDVKDEVYKLMRSGEDRKMECVEWNGTLTEEEKNKLRCLQMGSFNITTQFFKIGYWELEGE 240 Salmonella enterica s...
P40722 161 HPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGE 240 Salmonella enterica s...
5CQ9_A 241 VLFDMVHPTLSYLLQAYKPslSSDLIETNTMlFSDVLNKDYDDYQNNKREIDAILRRIYRSHNNTLFISEKSSCRNMLI 319 Salmonella enterica su...
P40722 241 VAFSMMHPCISYLLHSYSP--FSEFKPTNSG-FLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILL 316 Salmonella enterica su...
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