Conserved Protein Domain Family
Kdo_hydroxy

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pfam11004: Kdo_hydroxy 
3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase
This is a family of 3-deoxy-D-manno-oct-2-ulosonic acid 3-hydroxylases, which catalyze the conversion of 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) to D-glycero-D-talo-oct-2-ulosonic acid (Ko). It contains a potential iron-binding motif, HXDX(n)H (n>40). Hydroxylation activity is iron-dependent.
Statistics
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PSSM-Id: 491553
Aligned: 14 rows
Threshold Bit Score: 370.107
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q0A4T9            14 YEHPGDRLERTLEEGNILLFEPGRLPLpSEEDLHFLRSEVGRLIKl-KNISYHPHGDYI---SG---MKNEGDaGEQVLR 86  Alkalilimni...
Q7NX88             8 vkEGDKGLVSRLEAGAVLHVPDFGFTL-SAAEQALLNPAIADPKR--KNISLEPNNGAL---HG---VLGGDDaQRAVRA 78  Chromobacte...
1_pfamImport       1 ADNPHQEWITALEAGKVLYFPRLGFQL-LESERALLDPAVRDPKV--RNISLDAR-GHI---KG---AAGDAEqQLALAA 70 
nioo:CFU_0827     23 ISTPNSAWISALEAGKVLYFPHLSFIF-TADEQRFLTPAIRDPKS--RNISLDAN-GKL---KG---ALGDAAdHAALAN 92 
2_pfamImport       1 SPETQATLRRELEQGAVLYFPNLHFRF-APGEERFLDSRYSDGKS--KNINLRANEGAV---RG---AAGTQQdLTDLYN 71 
WP_013148366      17 DSSVRDEVIDALEHGHVIALPQLEFKL-LPEEQKFLSPDWADKKS--KNISLRPRAGGVsglKG---AIGSEAdLSAIQA 90  Methylotene...
jgi:Acid345_2070  22 aADRSRDWCSELESGKILLFDGVPFDL-PSEDRDFLLSQKQAASRfhKNISYRPEKNIL---RG---IANDSPdRERMQQ 94 
WP_015897158      18 TPEQARDWCAQLESGDILYFPQTPIAL-SPDDIAFLRGQQQTDSSlhKNIAYKPSLDKL---SGfdaKTANAEaVARLQS 93  Acidobacterium
WP_013182360      17 pETIKERSIQKLENGSILLYPHLKFGL-EEQEKEFLTPEVLKPGT--KNISYQIQTDSL---SG---LQLSGEaGERLRQ 87  Waddlia cho...
Q83CY7            17 TKEIQSEIIEQLEKGKVIYFPKLTFPI-NLDQGVFLDPNYLAKGQ--KNISYDPKTQSF---KG---LNPQKQnVAPLKE 87  Coxiella bu...
Q0A4T9            87 ILREHSRTVNAFLGRMLPGYATS---WSPRKVNFRPVQEKGRVIKRHSNNELLHVDAFPAGATHGWRPLRFFTNINPD-E 162 Alkalilimni...
Q7NX88            79 LISRYQHAAADLLARVLPEYQGK---TRAAPTSLRLVRVEDRKTSWRKDDSRLHVDAFPSRPTYGERILRVFCNINPAgE 155 Chromobacte...
1_pfamImport      71 MVGRFREQALGLVHSLLPKYSDA---LRVAPTSYRPMQVETRAQSWRADDRRMHVDAFPSRPNYGERILRVFTNINPDgV 147
nioo:CFU_0827     93 MIGRFRAQAQQLIHSLLPAYADSrseLRMAPTSYRPMQVETRSQSWRADDRRLHVDAFPSRPNYGERILRVFANVNPDgV 172
2_pfamImport      72 LIRRYAESTESLIHALFPEYGPH---MTRAGTSLRPSEIAGRPVSWRKDDTRLHVDAFPSNPLLGKRLLRVFHNIDPE-A 147
WP_013148366      91 MIQRYADQSLQLISAILPSYMPN---LTIANTSFRPLEVETRASSYRKDDTRLHSDAFPSNPTQGTRLLRVFNNVNPYgK 167 Methylotene...
jgi:Acid345_2070  95 VMGRYSREVVNFVMRFLAPYARD---FKLDYASFRPLEEKSRDLVLHKRNDLLHVDAFPTRPTRGARILRVFTNINPI-V 170
WP_015897158      94 VMRGYSQSVVRFLTGFLSPYAAQ---WKLDYASFRPQEEQNRDLPLRRRNDRLHTDAFPTRPTHGARILRFFNNIHPD-R 169 Acidobacterium
WP_013182360      88 MIKRYAETSRKLIQKVFPTYIDH---IEMGRTSYRPVEAEGRQTSSRKDDTLLHVDAFPSSPVRGSRILRVFANINPSqI 164 Waddlia cho...
Q83CY7            88 IIKDFSTRATQLITTLFPYYHSK---FRIGRTSFRPAEIAGRKTSYRKDDTRLHVDAFPSTPMQGERILRLFCNINPYnQ 164 Coxiella bu...
Q0A4T9           163 ARIWRIAEQFRELYQAYGGAAGIA--PAPSLRQGVAerawsgalrglsalglpqlQVVGDTSPYDRAMRRMHNWMKDSDD 240 Alkalilimni...
Q7NX88           156 PRVWRVGEPFEDMARKMLPRVPVQwpGSAALLAALK-------------------ITKRKRSGYDHIMLHLHDAMKADLE 216 Chromobacte...
1_pfamImport     148 PRVWRVGEPFETVARRFLPRAKPYvrWQASVLKALH-------------------VTKSLRSEYDHLMLQLHDGMKGDMQ 208
nioo:CFU_0827    173 PRVWRVGEPFEDVAQRFLPRVKAYsrWQAQVLQALH-------------------VTKSLRSEYDHLMLQLHDAMKSDPE 233
2_pfamImport     148 PRVWRVGEPFADFAGRFVPKTHGMwpGQSWLMKTLH-------------------ITKRARSEYDHRMLQLHDLAKADLD 208
WP_013148366     168 PRVWRVGEPFDKMAEAYLPKTKALlpMQAWLMKQLH-------------------ITKRTRTEYDHRMLQLHDQLKADMH 228 Methylotene...
jgi:Acid345_2070 171 DRVWTTGEPFHVMAPGLARPAGLPhfANPSLAQRFVfatqra--------ghvigLPFPNRSRYDRFMLHFHDWLKENSN 242
WP_015897158     170 TRDWVVGDPFAQTVRQFAP---------AQIAPRPGtlvsrsgkalgralglskaLPGLKRTPYDDFMMRFHNFLKENET 240 Acidobacterium
WP_013182360     165 PRVWKVGEPFEDVIRQMAPRVKKPftPIFPLMKWVG-------------------ITKSLRSPYDHYMLNIHDSMKKDQS 225 Waddlia cho...
Q83CY7           165 PRQWHLGESFGQVIKQFAPAVSPPlpLAHTLLNLLG-------------------ITKRKRSLYDHYMLKIHNTMKGDEE 225 Coxiella bu...
Q0A4T9           241 YQNDPDRgVQLAFEPFHSWCVFTDLVSHAALAGQHALVATYYVKPEACHLPERSPWQVLEQAGQA 305 Alkalilimnicola ehrlichii ...
Q7NX88           217 YQKNCPQ-ETVPFAPGGAWICFSDHASHAVMSGQFMLEQTLWLPLEKMDDPAKSPLRQLERLTGR 280 Chromobacterium violaceum
1_pfamImport     209 YQQDAQQ-VTMPFAAGSVWICFSDQASHAVMSGQYMMEQTLHLAPERQYDPQSSPLAILTRLVGH 272
nioo:CFU_0827    234 YQKDGPQ-VTQPFAAGSVWVCFSDQTPHAVMAGQYMLEQTLHLPAAKQYDPGASPLAILRRLTGR 297
2_pfamImport     209 YQKSVPQ-QEFQFPPGSTWIVFSDQLLHAAMRGKAMMEQTIYLDPAAIGDRTHSPEAVLSKMLGK 272
WP_013148366     229 YQQHAPQ-QSVNFMPGTTWIVYSDQVLHAAMAGQYMMEQTFSLPANALKWPETAPLKVLEKMLNK 292 Methylotenera versatilis
jgi:Acid345_2070 243 FQQNSPK-VRTDFSPGCSWLVYTDGVPHAVLSGQYVLEQTFIIPQRALVAPERSPLQVLETIANT 306
WP_015897158     241 YQQQTAR-YPWQFPAGSSWMVYTDTVPHAVLAGQYALEQTFLVQPEALVRPEVSPLRVLEDIAGA 304 Acidobacterium
WP_013182360     226 YQNTCPQ-QVVQLPAGSTWMVYTDQVPHAVLSGQFVLEQTFYLPVEGMQNQQTSPLRQLESLLNQ 289 Waddlia chondrophila
Q83CY7           226 YQKKAIQ-EKIAFPANTTWVVFTDLVSHAALSGQHLLEQTFYIPPTAQFFPQYSPLKKLETLLGH 289 Coxiella burnetii
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