3JX8,3LYC


Conserved Protein Domain Family
DUF2807

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pfam10988: DUF2807 (This model is not part of the current CDD release)
Putative auto-transporter adhesin, head GIN domain
This bacterial family of proteins shows structural similarity to other pectin lyase families. Although structures from this family align with acetyl-transferases, there is no conservation of catalytic residues found. It is likely that the function is one of cell-adhesion. In PDB:3jx8, it is interesting to note that the sequence of contains several well defined sequence repeats, centred around GSG motifs defining the tight beta turn between the two sheets of the super-helix; there are 8 such repeats in the C-terminal half of the protein, which could be grouped into 4 repeats of two. It seems likely that this family belongs to the superfamily of trimeric auto-transporter adhesins (TAAs), which are important virulence factors in Gram-negative pathogens. In the case of Parabacteroides distasonis, which is a component of the normal distal human gut microbiota, TAA-like complexes probably modulate adherence to the host.
Statistics
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PSSM-Id: 519565
Aligned: 41 rows
Threshold Bit Score: 99.6187
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3JX8_A        22 DYDEITFVGSADFEYEQSDKaPYLSVTIDENLFDYLVTEVEGGTLKIYPK------SIKKGFNnnsydlrptvYKIKSNS 95  Parabacteroides...
WP_015481505  28 DYTTLKVYNGIELELIKSTE-SKLVITGNKS--EMVTVKNVDNILKITLPfsikpeNNSANGQ----------VLVKLYY 94  Polaribacter sp...
WP_011964577  26 NFIKVTAFDKISVQLIQSTE-NKIELKGKFE--NEAILINNNGELKIRLPl----gNFLNGDD----------LVAKVYF 88  Flavobacterium ...
WP_013305865  30 PFSEIKAFDGLSINLIKGSE-NKAVITGVNT--KNVAIINNDGVLKIRMQi----tKLFSGYR----------TFIDVYY 92  Maribacter sp. ...
EAR16606      22 PFREIKVFDGISLNLIRSDR-NQAVVRGENT--RQVAVVNNDGILKVRMEi----tKIFSGYR----------TFVDLYY 84 
EAR14366      21 NFHEIKVFDLIEVNMIRSDE-NRIVIKGDRA--GDIEFVNRDGVLKLRMEf----dKKFRGED----------TLIEVYY 83 
WP_013304623  28 DFNKIKVFDLIEVNLIKSDE-NRITIKGDNV--FDIKVVNDNGTLKLRMQl----dKRFRGED----------TFIEVFY 90  Maribacter sp. ...
EAR14562      26 DFTAVSASEGLDVYVTQGDV-YDIRVEADENVIDLIGTDIRDGKLKIHAI------ENIGRAT----------KNVYVTL 88 
WP_015480455  45 DFTKIKVSTGLDLYLSQGNE-NKITLESDENLHEIIFTEVENGELKIYSE------KNIWNAKa---------KKVYVTV 108 Polaribacter sp...
WP_011962837  49 PFTKIEVSQGLDCEVTQGDI-QKVVIEADDNLQAGIITTVTNGVLQISSKy-----SNFNNVKa---------KKIKVQI 113 Flavobacterium ...
3JX8_A        96 KE-LKELNTvgsgsfiiskptkvnrxeinxAGSGNVELRGpvKGYKLECNXAGSGNIIAkDIQLDNLSCSLASSGEIEVI 174 Parabacteroides...
WP_015481505  95 MNpIAVIDA---------------------NEGAAITGKEv-KQEKLEVNSQERAFINL-VLDVKHLEVRASSGGIIKLS 151 Polaribacter sp...
WP_011964577  89 TK-LEGLEA---------------------NEGSYVSCDTeiKALDFSLIAKEGSQIKA-IVNAQRISIKSSNGSIIKLS 145 Flavobacterium ...
WP_013305865  93 TNkLVVIDV---------------------NEDAKISSKEpiQQDVLELKAQEGGELSI-SAEVEQLLVKTVTGGVIETF 150 Maribacter sp. ...
EAR16606      85 TDpLLIIDV---------------------NEDARIESRDviRQDVLEVKAQEGGEIVL-EAEVTQFLVKAVTGGIITAS 142
EAR14366      84 TD-ILVVDA---------------------NEGARITCNEmiEQDRIELRAQEGARIEV-GMKVRDAEIRAVTGGMVYAS 140
WP_013304623  91 KH-LDVIDG---------------------NEGAKIVCNEliKQDHLEIRSQEGAQIKA-GLDVVDLEVRAVTGGIVEAS 147 Maribacter sp. ...
EAR14562      89 PE-ITALSA---------------------SSGSDLETRGtiASRNIRLDASSGADLKA-AVEADEVEADCSSGADIRVS 145
WP_015480455 109 KD-LTSLVA---------------------TSGADVVTEEelNVKNINVICTSGADIDI-ELNANSVISTATSGSDIELN 165 Polaribacter sp...
WP_011962837 114 PI-ILGLEA---------------------TSASILVTKNniKGNIIYLKTSSASNIIA-NVEAEKIILEATSGSDLNIE 170 Flavobacterium ...
3JX8_A       175 GTVDRASFNVAGSGEIKAFDCQ-ARKAECNIASSGEISVYATQILDANIVGSGEIHYKGDP 234 Parabacteroides distasonis ATCC 8503
WP_015481505 152 GTVKNQDVNVDLYGIYNGYALLaTSNSTVNAGTGAKAEISAGETLKAKVSFGGSIFYKGNP 212 Polaribacter sp. MED152
WP_011964577 146 GNAQNLDAVTNSGGKLEAEKCL-TSQAKISVNAGGFADIYATDLVDAKTRAGGTITIYGNP 205 Flavobacterium psychrophilum
WP_013305865 151 GSADLQDVAINTGGVYQGKELI-TKFSTINVNAGSKAEIYATNYVKATVKAGGEVLVYGDP 210 Maribacter sp. HTCC2170
EAR16606     143 GKSKNQDVQINTGGIYQGRDFA-TGFCTVNVNAGSTAEIHASDYVKATVKAGGKVFVYGDP 202
EAR14366     141 GLATNQVITLNTGGIFEGRDLE-TETSSIRVSAGGEAELFAREEVDIQIRAGGDVYVYGNP 200
WP_013304623 148 GLAENQWVVLNTGGVFEGRELK-TSNTDIKITAAGEAEVFASEKVDINVKAGGDVYVYGNP 207 Maribacter sp. HTCC2170
EAR14562     146 GRTNLFYADASSGSDIKAGDLQ-AKICHANASSGADIRVYATESLTADASSGADIHYSGEA 205
WP_015480455 166 GSTINHTSSATSGASIEAYGLR-SENVTVNVTSGADINIYASVSLDARATSGGDIDYKGKP 225 Polaribacter sp. MED152
WP_011962837 171 GKALEVTTVSSSGSSIDASRLL-ANDISSQSTSGSTTIVNPILKLKAHASSGSTIQYSKTP 230 Flavobacterium psychrophilum
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