Conserved Protein Domain Family
Tlde1_dom

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pfam10908: Tlde1_dom 
Tlde1 domain
This domain is found in Tlde1 family of antibacterial effectors secreted by the type VI secretion system (T6SS). Tlde1 family is evolutionarily related to l,d transpeptidases which form mDAP3-mDAP3 peptidoglycan crosslinks. Tlde1 family is widespread among Proteobacteria and is divided into three subfamilies (Tlde1a, Tlde1b and Tlde1c).
Statistics
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PSSM-Id: 491486
Aligned: 18 rows
Threshold Bit Score: 113.323
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012402667   10 GDFAAFSGNDGWtKNNPAAAAIPKAGPLPPGRYYIVDRGSGGFFTHIKDFildlwsnteRGTWFALYRDDgeIDDWTFVE 89  Paraburkholder...
XP_003287163   21 HVATGYSGNGTH-INKADSQGVKSKGPLPRGTYTMNEPRKSDKTGAYAMD----------------------LTPSPENN 77 
A0EGT7         53 NTF-GYSGAGKY-RNDPKAQCIKNQGPAPSNTYTIKTCQNTMHNPPVDRP---------CSFW---------IDGNDQDR 112 Paramecium tet...
A0BGR1         53 KTF-GYSGSGQY-RNDPASMCIKNKGPAPATTYKITLCKNTMHNPPVDRP---------CSFW---------IEAVDEKT 112 Paramecium tet...
WP_011926345  229 IGLEAHSGMGNL-RDDPEHVNQRMVGATPPATYDLKPREKP----------------------FHGVRALrmNVVEGTT- 284 Bradyrhizobium...
WP_012591316  250 TRLEAHSGLGEL-MDDPRHVDKPMRGATPPNVYELSMREEL----------------------FHGVQALrlTPIGGEV- 305 Methylocella s...
jgi:Xaut_3572 274 DKLEAHSGYGEL-LDDPRHVAKRMVGATPPNTYSLTMRESL----------------------FHGVEAVrlNPV-GTGK 329
BAF86716      262 EKLEAHSGYGDM-FDDPRYVHKRMVGPTPPNIYELKMREAL----------------------FHGVEAIrmKPV-GDQP 317
Q7CXY6        294 EKLEAHSGIGKM-RDNPDYVHVRMRGSTPPSSYRLTMREAR----------------------FHGVEAIrlTPESGVNP 350 Agrobacterium ...
Q6N7U7        291 SKLEAHSGLGAR-MDDPRHVSVKMQGATPPHIYDLKMREKL----------------------FHGVAAIrlTPVGGEDV 347 Rhodopseudomon...
WP_012402667   90 GVRRGNFRLHP--H-GRL--------NLSEGCITLADPVGFFRLRDHLIHT-ARMAIPGG 137 Paraburkholderia phymatum
XP_003287163   78 MEGRDSFQIHGdnSkGDK--------SASEGCIILSRDIREKMWTSNIHKLkVVDKVSqa 129
A0EGT7        113 MCGRTEIMIHGcaCcTPSdwsvppvdGCSAGCIIINEEN-------------RKKLRVGD 159 Paramecium tetraurelia
A0BGR1        113 MCGRSEIFIHGcqCcSNGdwteppvdGCSAGCVIINEAN-------------RKKLRvgd 159 Paramecium tetraurelia
WP_011926345  285 -LGRSGLLTHPymL-GPE--------GDSNGCVSIKNYDRFLKAYDDGEFN-RLVVVVGL 333 Bradyrhizobium sp. ORS 278
WP_012591316  306 -YGRNGFLAHTymL-GAA--------GASNGCVSFKNYGSFLQAYQNGSIK-RLLVVARL 354 Methylocella silvestris
jgi:Xaut_3572 330 MYGRAGILAHTymL-GPR--------GDSNGCISFKDYEKFLTAFKRGEVK-KIVVVAQL 379
BAF86716      318 MYGRDGILAHTymL-GPR--------GDSNGCVSFRDYEKFLAAFKRGEVT-RMVVVTSL 367
Q7CXY6        351 -HGRDGLLAHTymL-AKR--------GESNGCVVFRDYPRFLAAFKRGEIK-RMVVVPKL 399 Agrobacterium fabrum str. C58
Q6N7U7        348 IYGRTGLLAHTymL-GPR--------GDSNGCVSFKDYNAFLQAFKRGEVK-RLVVVGNL 397 Rhodopseudomonas palustris
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