Conserved Protein Domain Family
WYL_2

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pfam10902: WYL_2 (This model is not part of the current CDD release)
WYL_2, Sm-like SH3 beta-barrel fold
WYL_2 is a family of Sm-like SH3 beta-barrel fold containing domains. WYL is named for three conserved amino acids found in a subset of domains of this superfamily. These residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system
Statistics
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PSSM-Id: 519548
Aligned: 35 rows
Threshold Bit Score: 64.2618
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6WI26         4 V-NIDDLLKNGKVTFEFEKADGTIKTVTGTRNLDFIPAEfhpkekplaEGETKPEKTEKQKATCGYFDLEANGWRSFKRA 82  Vibrio phage KVP40
P17308        12 ReILKTKLSMGVSNVVFEKSDGTIRTMKGTRDADFMPTMq--------TGKLTESTRKESTDMIPVFDVELGAWRGFSID 83  Tequatrovirus T4
WP_022307349  34 IeSLKEKLRSGVAHFIFIKKDGTVREAFGTTNAAVARKY-----------TNGNGCSRELYSTTAYFDIEKGAWRSLRWE 102 Alistipes sp. C...
CCX65378      35 IeNLKTKLQNGIAHFTFIKKNGELRECWGTTQPNLAKAK-----------TNGNGESRENYCTTAFYDVEKGTWRSFRWE 103
WP_007751571  40 IgALIRQMHHGNVRFHYTRQDGSVRHAIGTL----TGYE---------HSFHQPYIPRPENTFVVYYDIEAKGWRTFHAE 106 Bacteroides fin...
WP_005682768  40 IdVLIRKMYLASVSFYYTKQDGSIRHAVGTL----TGYE---------HCFHRPYTPRPENTFVVYYDLEAKGWRTFHAE 106 Bacteroides caccae
WP_022042017  39 CiELIERMLYGNAMIAFHKQDGTFCMEQGTL----VGYE---------KDFHREFKITSRQMSVVYWSMEQHAWRRFMIG 105 Bacteroides
Q8AA72        46 VkSLADYMQYGHAIIAYYRQNGSFQLVTGTL----ISYS---------KDFHHSYDMKQVHSTFIFWCMEEKGWRTFQIE 112 Bacteroides the...
WP_274972461  40 IeSLIDHMQYGYVLVAYYKQDGTFKLVKATL----IPYE---------AGFRRKYEIARVTSTLVFWDVEQQAWRSFQLA 106 Bacteroides fluxus
WP_009125855  41 IgDLIDYMQYGHALIACHRQDGTFRLAKATL----LPYE---------ACFHRKYETARVKGTIVFWDVEQQAWRNFQLE 107 Bacteroides fluxus
Q6WI26        83 NLR 85  Vibrio phage KVP40
P17308        84 KLI 86  Tequatrovirus T4
WP_022307349 103 SIV 105 Alistipes sp. CAG:268
CCX65378     104 SLV 106
WP_007751571 107 NFL 109 Bacteroides finegoldii
WP_005682768 107 NFL 109 Bacteroides caccae
WP_022042017 106 NLL 108 Bacteroides
Q8AA72       113 NFL 115 Bacteroides thetaiotaomicron
WP_274972461 107 NFL 109 Bacteroides fluxus
WP_009125855 108 NFL 110 Bacteroides fluxus
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