2OXL


Conserved Protein Domain Family
YmgB
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pfam10798: YmgB (491430 is an unknown moldel)
Biofilm development protein YmgB/AriR
YmgB is part of the three gene cluster ymgABC which has a role in biofilm development and stability. YmgB represses biofilm formation in rich medium containing glucose, decreases cellular motility and also protects the cell from acid which indicates that YmgB has an important function in acid-resistance. YmgB binds as a dimer to genes which are important for biofilm formation via a ligand. Due to its important function in acid resistance it is also known as AriR (regulator of acid resistance influenced by indole).
Links
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Statistics
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PSSM-Id: 491430
Aligned: 8 rows
Threshold Bit Score: 76.2417
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2OXL_B        5 EESAVLGQAVTNLXLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADD 63  Escherichia coli
WP_013025310 25 SDMEILGLVVAEILQSGMAVNNKAIISKLIHRLELESDEVSLDVYRHLLEMVVYKTPDD 83  Pantoea
Q6D6C1       23 SDMEMLGNIVEEIIQSGHSVSNKAIIAKLIHKIETEANTAFQEKYRTLLDLIVYKTQDD 81  Pectobacterium atrosepticum
WP_022548827 24 NEMEVLGHLIAEILHSGMPVTNKAIIAALIGRLEQEADVVQLDVYRHLLELVVHQTPDD 82  Plautia stali symbiont
1_pfamImport  1 QETELLGRVIRNIVSDEKRVTNKAIILYLIAELESTDDEFHIELLRRTLEIVVGRTPDD 59 
Q8ZPX7       23 CEQRAIQEITYELLQSQQHVSNKDIIAKLIEKLETEKDVVQLDIYRNALEAVLFQTPDD 81  Salmonella enterica subsp. enterica s...
WP_022548627 26 SEKEIIALIYKQLAAVKLRVSNKDIILALLERLESEHDVVQLDIYRQALELIVQRTPDD 84  Pantoea sp. Ap-870
Q326Q1       18 IESSIINSIANEVLNPISFLSNKDIINVLLRKISSECDLVRKDIYRCALELVVEKTPDD 76  Shigella dysenteriae Sd197
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