2OXL


Conserved Protein Domain Family
YmgB
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pfam10798: YmgB 
Biofilm development protein YmgB/AriR
YmgB is part of the three gene cluster ymgABC which has a role in biofilm development and stability. YmgB represses biofilm formation in rich medium containing glucose, decreases cellular motility and also protects the cell from acid which indicates that YmgB has an important function in acid-resistance. YmgB binds as a dimer to genes which are important for biofilm formation via a ligand. Due to its important function in acid resistance it is also known as AriR (regulator of acid resistance influenced by indole).
Links
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Statistics
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PSSM-Id: 491430
Aligned: 9 rows
Threshold Bit Score: 76.2417
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2OXL_A        5 EESAVLGQAVTNLXLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADD 63  Escherichia coli
1_pfamImport  1 SDMEILGLVVAEILQSGMAVNNKAIISKLIHRLELESDEVSLDVYRHLLEMVVYKTPDD 59 
Q6D6C1       23 SDMEMLGNIVEEIIQSGHSVSNKAIIAKLIHKIETEANTAFQEKYRTLLDLIVYKTQDD 81  Pectobacterium atrosepticum
P75993       29 EESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADD 87  Escherichia coli K-12
2_pfamImport  1 QETELLGRVIRNIVSDEKRVTNKAIILYLIAELESTDDEFHIELLRRTLEIVVGRTPDD 59 
Q8ZPX7       23 CEQRAIQEITYELLQSQQHVSNKDIIAKLIEKLETEKDVVQLDIYRNALEAVLFQTPDD 81  Salmonella enterica subsp. enterica s...
3_pfamImport  1 SEKEIIALIYKQLAAVKLRVSNKDIILALLERLESEHDVVQLDIYRQALELIVQRTPDD 59 
Q326Q1       18 IESSIINSIANEVLNPISFLSNKDIINVLLRKISSECDLVRKDIYRCALELVVEKTPDD 76  Shigella dysenteriae Sd197
BAN98536     24 NEMEVLGHLIAEILHSGMPVTNKAIIAALIGRLEQEADVVQLDVYRHLLELVVHQTPDD 82
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