8K58


Conserved Protein Domain Family
Phage_RpbA

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pfam10789: Phage_RpbA (This model is not part of the current CDD release)
Phage RNA polymerase binding, RpbA
Upon infection the RpbA encode phage protein binds to the ADP-ribosylated core RNA polymerase and modulates function to preferentially bind T4 promoters. This is a non-essential protein to the phage life cycle.
Statistics
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PSSM-Id: 519533
Aligned: 8 rows
Threshold Bit Score: 106.786
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8K58_G        13 KDIQPKhVRSESNpqnqNKIRRAWVLSLSDNAMEVIQNKIKSApaRHAYYEAIDREVSNKWIELMRKHTTESLNAGAKFI 92  Escherichia pha...
Q6J2Q2        14 QDIQGK-ISDSAD----TKIRKAWVLQTPDTLREMYQAMPLES--RRALYKSLDKEVLELWISKMRQHREDALANGVKMI 86  Acinetobacter v...
Q7Y580        11 ADLKVTsIRTDANphnhNRVRKAWVLHCDDASAKKLQSLPQET--RFMIYGFIDNDVSDMWIHLMRKHYKDSIEAGGKIV 88  Enterobacteria ...
3_pfamImport   1 ADIQNKkTSLEFDra-mNKIRKAWVLQMPESEKAKMKVIPQQA--RFELYAHIDDMVQKEWIAAMRKYYDDSIAKGAKTI 77 
Q76Z69         7 GDSLKT---LSAAyfyqNLARKNWVCLMTQEEYDRLQCLERDV--RFDVYKEFDDDVIETAIRLSQKFRAENLNCKREFV 81  Aeromonas virus...
2_pfamImport   1 ADIRPL---SDNIyetsVKIRKAWVANISDVRANQLQAIEQSV--RFELYAEIDNLVRDMYVDLLQRRRAMILANGGYHV 75 
Q7Y5F2        11 ADIRPM---SDNVfensVKIRKAWVSFISDIRANQLQALEQKI--RFELYAEIDKMVRDTYIDLLVRRRESILVNGGYHV 85  Aeromonas virus 25
Q5QC26        11 KDIQVKtIRTDSNphnqNRIRKSWVLNIDTNSARRLQSLPQET--KFMLYGIIDNDVSDKWVEIMRRHYNDSLAAGAKLV 88  Escherichia pha...
8K58_G        93 MTS-CGERLEDDYCGNADERLIVAAQIVA 120 Escherichia phage T4
Q6J2Q2        87 RVN-GFYRLPDEYCDQQDQMLIDAALEVI 114 Acinetobacter virus 133
Q7Y580        89 LDKdGSERLEDFYCVDADEQLIAAGEIVA 117 Enterobacteria phage RB69
3_pfamImport  78 R---GKDILEKGYQIDTDELLIEAASVVV 103
Q76Z69        82 ------------------EFFPDAAILVY 92  Aeromonas virus Aeh1
2_pfamImport  76 KGMnDKPVFAKQFQYDTDELIITAAEMVM 104
Q7Y5F2        86 KGMnDKKVLAKQFQYDTDELIIQAAQTVM 114 Aeromonas virus 25
Q5QC26        89 IDRdGSERLEDDYCVDPDEQLLEAGAIVA 117 Escherichia phage JS98
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