Conserved Protein Domain Family
LEA_6

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pfam10714: LEA_6 
Late embryogenesis abundant protein 18
This is a family of late embryogenesis-abundant proteins There is high accumulation of this protein in dry seeds, and in the roots of full-grown plants in response to dehydration and ABA (abscisic acid application) treatments. This LEA protein disappears after germination. It accumulates in growing regions of well irrigated hypocotyls and meristems suggesting a role in seedling growth resumption on rehydration. As a group the LEA proteins are highly hydrophilic, contain a high percentage of glycine residues, lack Cys and Trp residues and do not coagulate upon exposure to high temperature, and for these reasons are considered to be members of a group of proteins called hydrophilins. Expression of the protein is negatively regulated during etiolating growth, particularly in roots, in contrast to its expression patterns during normal growth.
Statistics
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PSSM-Id: 371207
View PSSM: pfam10714
Aligned: 6 rows
Threshold Bit Score: 106.086
Threshold Setting Gi: 75099213
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O64820        14 VKEVKNDDLESIKTPYLDYDNLEDYKMKGYGAQGHQEPKLGMG-GGATDAPTPSGglgrgGGAASTDLSSTD-AINRQGV 91  thale cress
XP_006386132  17 EKKGKLDGLPMESSPYLKYTDLEDYKRIAYGTEGHQEVKPNQG-GGGTDAPTLSE-----NDLSPGKMAIIDaAANRHGI 90  black cottonwood
XP_010663997  20 EKASKLRGLPMESSPYLKYTDLEDYKRQGYGTEGHLEPKPNQG-GGGTDAPTLAG-----TDLSKGPASVVD-AAHRVGI 92  wine grape
XP_006339827  70 IDKSKLEGLPVDTSPYTQYKDLEDYKQQGYGTQGHQQPNPGRGaASSTDAPTLAGg---gPASAQAQLSATD-NINRQGV 145 potato
Q9S7N8        21 VKESSTEGLPMEDSPYVKYKDLEDYKRQGYGTQGHQEPKTGRG-AGATEAPTLSGa----AVSSDAQVAATD-AINSKGV 94  soybean
EEF29227      22 KKESVDQILPIKDSPYLQYKDLEDYKKKGYGTEGHLQPKPGRG-AGATDAPTLSGg----SVPREADVSTID-AITSK-- 93  castor bean
O64820        92 P 92  thale cress
XP_006386132  91 P 91  black cottonwood
XP_010663997  93 P 93  wine grape
XP_006339827 146 P 146 potato
Q9S7N8        95 P 95  soybean
EEF29227      94 P 94  castor bean
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