Conserved Protein Domain Family
NPCBM_assoc

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pfam10633: NPCBM_assoc 
NPCBM-associated, NEW3 domain of alpha-galactosidase
The English-language version of the first reference can be found on pages 388-399 of the above. This domain has been named NEW3 but its actual function is not known. It is found on proteins which are bacterial galactosidases. The domain is associated with the NPCBM family, pfam08305, a novel putative carbohydrate binding module found at the N-terminus of glycosyl hydrolases.
Statistics
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PSSM-Id: 491309
Aligned: 17 rows
Threshold Bit Score: 54.3158
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q67KR5        439 VTRGATTTLTLTAFQGG-QVPVEDVSLSLSL-PRGWKa--TATAVVNGV-DLAYNKTATAKWDVTIPTNAEyFDpyhpHE 513  Symbiobacteri...
A9WNA0       1058 IEQGQTNTFSASFSSSE-AQSIAGLSVALDL-PAGWTa--SAATPATAA-TLPAGGSLETQWKVQVPADAD-GD----YT 1127 Renibacterium...
P96937       1007 gQPGDDVVLRLTAASDC-TDSVLGGVVDVVC-PLGWP-----ATPARLPfTLGAGAHLQADIALSIPAGAPpGP----YP 1075 Mycobacterium...
Q73SF3       1200 aDPDSRVTLRLSAASDC-TDATLAGAVVLRC-PDGWS-----ADPAELPlRLCAGQHLQADIAVSVPARAApGL----YP 1268 Mycobacterium...
WP_011727624 1171 AEPDSQVALRLTVASDC-TDAPLHGRVRVTV-PPGWT-----VATTELSfVLPPDEYLETEVVIDIPPGAEpGL----YP 1239 Mycolicibacte...
O86617       1098 LSPGVPGEYVTAFTNHE-SAGAENVGIALQGlPEGWKaevKEKDGNLFE-RVQPGATVRTTWLLTPPAGTAg-------- 1167 Streptomyces ...
WP_011941612  821 AIPGQPVKVKVSLSAGG-EATLRHVRLRLDA-PAGWRv--SAIGSAAGE-GIQPGEAVRATFTVTPPGWAAaGT----YA 891  Acidiphilium
Q0W633        359 SKPGQPFTINVYATNNGqGSALTNVYPSIEV-PSGWT---VSTSPESVS-SIRAGETQVFKVTVQPPANIVaSD----YN 429  uncultured me...
Q5SIB6        260 VTAGRENAVKLVVKNEG-SAPAKNLSFSAFE-PSGWE---VKFEPERLE-VLEPGKEAEVTARIKPSSKAVaGD----YM 329  Thermus therm...
Q67M97        263 AVAGRKNGVTLEVKNTG-TTEITGINFASTL-PPNWT---ATFSPDSID-ALAPGESRQVTVEVTPNSKALaGD----YL 332  Symbiobacteri...
Q67KR5        514 ITGVIRFS 521  Symbiobacterium thermophilum
A9WNA0       1128 IKAKASYQ 1135 Renibacterium salmoninarum ATCC 33209
P96937       1076 VRAQLRVv 1083 Mycobacterium tuberculosis
Q73SF3       1269 VRAELRLT 1276 Mycobacterium avium subsp. paratuberculosis
WP_011727624 1240 VRAELAVT 1247 Mycolicibacterium smegmatis
O86617       1168 --TSATWQ 1173 Streptomyces coelicolor
WP_011941612  892 LRAVAQLG 899  Acidiphilium
Q0W633        430 VKVTVK-S 436  uncultured methanogenic archaeon
Q5SIB6        330 VTLRVS-G 336  Thermus thermophilus HB8
Q67M97        333 VTLRAR-S 339  Symbiobacterium thermophilum
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