4II2,8SE9,7SOL,7SOL


Conserved Protein Domain Family
UBA_E1_SCCH

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pfam10585: UBA_E1_SCCH (This model is not part of the current CDD release)
Ubiquitin-activating enzyme, SCCH domain
Ubiquitin-activating enzyme (E1 enzyme) activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin-conjugating enzymes (E2). This domain carries the last of five conserved cysteines that is part of the active site of the enzyme, responsible for ubiquitin thiolester complex formation, the active site being represented by the sequence motif PICTLKNFP. The catalytic cysteine domain contains the E1 active site cysteine, and is divided in two half-domains, FCCH and SCCH, for 'first' and 'second' catalytic cysteine half-domain, respectively. This is the SCCH domain in which resides the catalytic cysteine.
Statistics
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PSSM-Id: 519460
Aligned: 202 rows
Threshold Bit Score: 73.4039
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4II2_A         588 PNRIEHTIAWAR-D-LFEGLFKQPIDNVNMYL---------SSP-NFLETSLKTssnp------revLENIRD---YLv- 645  Schizosaccha...
22_pfamImport    1 PYNTVHCVEFSV-N-EFKKEFEDNLNKICEFSekifskfdkKQVlNAIENIKPNntnn-----dtdlLNSISNhivSLid 73  
A0C799         579 PYTKDHNIEWAL-E-YFNNLFEKASKDLYQLS---------QNPqTFLNTVYNQnqryid--ylkdqLELIEK---YVl- 641  Paramecium t...
XP_001708030   666 PNTIVHCIVYAT-S-EFKGVFEQGCADFAKLKt--------EGLqPFVDNLLKNkdtie---arllqLQTICM---KL-- 727 
XP_001317800   587 PTNISHTITWSL-D-LFGNMFESDPETVNSFL----------KDkDYVKHMKEEdigh-----vktaIEIVEK---MLi- 645 
XP_007397915   184 PSQPIHCIVWAK-SyLIPQLFGEEEDSGEELDeaekqgenaQEIaTLRKEAQA--------------FKKVRN---AL-- 243 
XP_002289358   607 PYLPKHCIEFAKqA-YFADYFEFGPEVYESFR---------KDPmSFFEQLDTMepg---------dqSRSLR---MIka 664 
XP_004990513   619 PHLIDHCIEWAR-A-KFTDLFVSPASQLQQFL---------EDPeGFISGLETKieqhvg-gerigaLERGVD---TLka 683 
Q38DE8         716 PYTSDHCTEWAR-A-QFDDLFVSPMQTVRQLL---------ENPaAFTERIKNEvnnaqsagerlslVEKNLG---ILqg 781  Trypanosoma ...
XP_001568403   657 PYIYDHCIEWAR-A-QFDDMFVSPMQTAQQII---------EDPaAFTQRIYHEvasgssagerrslIEKNMG---PLkl 722  Leishmania b...
4II2_A         646 -------TEKPLSFEEC-------IMWARLQFDKFFNNNIQQLLFNFPKDSVTSTGQPFW-SGPKRAPTPLSFDIHn--- 707  Schizosaccha...
22_pfamImport   74 kelivpiKSIPTTKTDC-------ITAAFVTFYTLFNIRIKKWLITFPLNHKTSEGTLFW-SPPKRPPFPLDFSFE---- 141 
A0C799         642 -------LVINPTLENL-------VRYAKELFSSLFDVKIKYLLSRYPADFLQQNGLLFW-TNPRRLPMSIEFNSTd--- 703  Paramecium t...
XP_001708030   728 --------------PHCvniidraCNWACALFEKYFILTIEKILSDFPVNAKDKDGNNFW-SGEKRPPHKLTYDANn--- 789 
XP_001317800   646 -------NNKPNDYKDC-------VLLMRNVYQKSFIDLIHEVLKKNPVDSVDDQGRKFWlSEGRRLPHPLDFDENd--- 708 
XP_007397915   244 -------QQSDVGSDDA----------ARLVFSKVFHDDINNLL---------SMAD-MWrTRAK--PTPLDFn------ 288 
XP_002289358   665 fidlqneAGGNIDFKGC-------IRIAFNRMMKDFRTSILDLCYS-ADEMEKSSGKKFW-TGTKRRPRAIDWTDPi--- 732 
XP_004990513   684 ikdlaaqLQEKPTMETC-------VSLAWRDFHAFFRDVILDLIATFPADAKTKSGEPFW-SGHKIFPEALVFDPQn--- 752 
Q38DE8         782 iqktvttLSAGVSMEKC-------VQCAWETMFHLFRDRILDLQRSFPKDAKKKNGEKFW-SGHRKYPTPLEVNIKalss 853  Trypanosoma ...
XP_001568403   723 lkrtltiLADGPTMDKC-------AALGWEQLFKMFRDRILDLQAAFPRGAKRKNGEDFW-SGHRKYPSALETSTAgisk 794  Leishmania b...
4II2_A         708 -REHFDFIVAAASLYAFNYGLks------------------etDPAIYER-VLA--GyNP---PP-FAPKSgIKIQ---- 757  Schizosaccha...
22_pfamImport  142 -KECLDYVLSFCELLSQNYSKnf------------------lfNENDIKA-FIE--H-NStylDE-FIKYKeWSITnden 197 
A0C799         704 -PLHCQFIHSVVKIVIKILGQql------------------qfDSEQISF-LVG--SiDI---------NKnKELFenlq 752  Paramecium t...
XP_001708030   790 -PIHHDFISTAARLYTVILGn----------------------DVDISSEtIMSi---AT---AY-FAASSaSPAKavil 839 
XP_001317800   709 -ELTKEFIKYGARLISEVYDI-------------------------------------KV---TD-EDPMEiLRNNdfqr 746 
XP_007397915   289 ------------GIKNGTFCIahkrt----------------------------ggalQVnggSS-KQPADgALVNgdta 327 
XP_002289358   733 -PLLMEYLYSTANLYASVWKVegv------------------rdrDEFQA-IVDelKlEQ---PQwEASGEkVDLSegdn 789 
XP_004990513   753 -PLHKEFLIAAANLYACVFKVhptkypseenklhtkrwmaeyrDESWLLS-TVG--GrDP---PP-YVR-HkVGDLddds 823 
Q38DE8         854 dPDVVEFLISAANLFACMYGIhpqkheprlnd-pkkrwmqqyrTLDWLNG-VMK--NcTV---PE-YKP-GsVEGLdddl 924  Trypanosoma ...
XP_001568403   795 nLDAKNFLVATINLYACMFGVhppkhearfny-eksrwmqeyrTDEWIQA-EVS--KlTI---PA-YVA-GsVDNLdddl 865  Leishmania b...
4II2_A         758 VNENE-EAPETa-----------------Ankdk---------------------------qelKSIADSLPPPSslVGf 792  Schizosaccha...
22_pfamImport  198 VSDLLsSEELEklntsvnnk-snnvdndiInnnndfnntnntsinsidkpkiseqnvfknyiedNLTKSDIKKIL--CLn 274 
A0C799         753 FNENEiKQEndmrmi-------------------------------------------kleklvQENILNMQQ------- 782  Paramecium t...
XP_001708030   840 TREVAaKQISNflnctynpe-tisqlladDtl------------------------------fdQEFLKHLSPWG--VTp 886 
XP_001317800   747 FSQKEnSDAnke--------------------------------------------------inNDIHSNLRETC--KP- 773 
XP_007397915   328 GGSAAtERMLDgtpsasglkagwgsaglkDqr-------------------------------aLTLQDNLGLFV--SSt 374 
XP_002289358   790 EESGSgDVAED------------------D----------------------------------EELKGELYKID--SSk 815 
XP_004990513   824 KAAATtDGSGGsdddagdgd-ddgaamdeAededp-------------------------qaafDALKGEVLTIA--KNv 875 
Q38DE8         925 LQSMEkQ--EV------------------Skdett------------------------keqtlNNLLSSVVALA--QKc 958  Trypanosoma ...
XP_001568403   866 AADVQeG--KQ------------------Tsteea-------------------------eaelHGLLADVAALA--SKc 898  Leishmania b...
4II2_A         793 ---------rLTPAEFEKDDdsNHHIDFITAASNLRAMNYDITPADRFKTK 834  Schizosaccharomyces pombe 972h-
22_pfamImport  275 q-------stMKPIEFEKDD--NLHIKYIASLSNLRAKNYRIKQTTHQNAK 316 
A0C799         783 ----------IRPFSYQKDKlsCVELEFITSAANLRGINYNIPPASRQQVR 823  Paramecium tetraurelia
XP_001708030   887 ra-----------lvFEKDDltNGHVQYIASLANLRAENYDIPTIDYAEAR 926 
XP_001317800   774 ----------LKSFSFEKDDpsNGHVDFIYATANLRAKCYGIITENKMEVK 814 
XP_007397915   375 nrlaarirngEETISFDKDDgdT--LDFVTAAANLRAAAYGIHGKSRWEVK 423 
XP_002289358   816 l-------qpAQPQEFEKDDdlNFHIDFLTASTNLRSWNYDIKASARHTVK 859 
XP_004990513   876 gs------atVEPLDFEKDDddNFHIDFIAAAANLRASNYRIPTATRHKCK 920 
Q38DE8         959 hn------mnTVPLDFEKDDddNFHIDFVAATSNLRARNYDIPTQDRFKVK 1003 Trypanosoma brucei
XP_001568403   899 kg------skAAALEFEKDDddNFQIDFVAAASNLRAENYGIPTQDRMKVK 943  Leishmania braziliensis MHOM/BR/75/M2904
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