5HQ4


Conserved Protein Domain Family
Glyco_hydro_97

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pfam10566: Glyco_hydro_97 (This model is not part of the current CDD release)
Glycoside hydrolase 97
This domain is the catalytic region of the bacterial glycosyl-hydrolase family 97. This central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, form two additional non-catalytic domains. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands.
Statistics
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PSSM-Id: 519449
Aligned: 45 rows
Threshold Bit Score: 297.632
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5HQ4_A          257 DVSWVKPGKYIGI-WWGMHINTHt-WGSGDKHGA---TTKNTKYYMDFAAKYGFDGVLVeg-wNTGWDGd---wFFngDV 327 Pseudoaltero...
jgi:AciPR4_1547 328 DTSWIHPGKASWN-WWVDNVNG---KGESGNKEF---TTETMKYYVDFAAKSGFPYFFL----DAGWA-------S---- 385
WP_012376026    309 DTSWIKPGITAWDvWWTGINPTQpgFTGLNSRG----DTRSHKEYIDFAAEMGFPYQLI----DWFWYEpm-nnPK---- 375 Opitutus terrae
WP_013534164    293 DTSWIRPGKSAWD-WWSGGLAPDvpEP-----GM---NTATIRRYIDHAAALGLEYMLVddgwYVGSTGn----GHynPD 359 Pseudoxantho...
Q9AA15          306 DTRWIKPGKAAWD-WWNGGKVAG--AE-----GM---TDAAMKGFIDFAAAHKLEYMLIddgwYVGSGQa----PKvlPG 370 Caulobacter ...
Q8P619          289 DASWVRPGKSAWD-WWSGSLA-----SGVAQPGM---NTATIQRYIDHAHQLKLEYMLI----DDGWYHgstgdGQynSD 355 Xanthomonas ...
jcvi:PRU_0270   277 DTSWIRPGKVAWD-WWNDWNLK----GVDFEAGI---NTRTYLYYIDFAAKNHIPYVVL----DEGWYd--------sSK 336
3_pfamImport      1 DTSWIKTGKVAWD-WWNDWNLK----GVPFKAGI---NMDTYKYYIDFASRNGLEFIVL----DEGWYD-----PK---S 60 
WP_015810814    295 DVSWVKPGKATDE-WIITSNIFNv-PF---KSGI---NTATYKYYIDFAKRFGFERIMM----DAGWS----------DN 352 Dyadobacter ...
Q8A2Z2          315 DTSWIQPGKSAWE-WWHKAVLE----GVDFPSGNkqlSPQLYKYYVDWASKNHIEYMTL----DAGWS------------ 373 Bacteroides ...
5HQ4_A          328 FSFTQPYDD----FDIAALTKYSKQTGv--QLIGHHETsgnvsNYRKQ-MADAFALYEKSNVSQVKTGYVADggnikrid 400 Pseudoaltero...
jgi:AciPR4_1547 386 QDITKTNGR----VDVPELVRYAAARNvkvWIWLYSE------AVMKQ-MKEAFPVYEQWGVAGMKIDFVNR-------- 446
WP_012376026    376 ----ADLTKpaahVDIPGLVAYARERNvrlLLWLDSHD------VERQgFDKVFAQIAAWGFAGVKIDFMNH-------- 437 Opitutus terrae
WP_013534164    360 ADITRAIPG----LDLEDLIAYAGDRGvgiWLWAHWR------SLEPR-LDEVFERYAQLGVKGVKVDFMER-------- 420 Pseudoxantho...
Q9AA15          371 TDVTRPIPA----INIADLIAYGRQRGvgiMLWVHWK------ALDAQ-MDEALAAYQAWGVKGIKVDFMDR-------- 431 Caulobacter ...
Q8P619          356 ADIRRPVEQ----LDLPGLVTYGRQRGvglWLWAHWRA------LDAH-MDEALAWYQQLGIKGIKVDFMDR-------- 416 Xanthomonas ...
jcvi:PRU_0270   337 ADIMNPIAA----IDLQQLIDYGKKKGvniVLWTVFNV------LDEH-LREACEKYTKMGIAGWKIDFLDR-------- 397
3_pfamImport     61 GDMLTVIPE----LDLPELIAYGKSKGveiVLWTVFNV------LDSQ-LEAACKKYADMGIKGFKVDFLDR-------- 121
WP_015810814    353 NDLFKINPD----IDMDEIVAYAKSKGvgiSMWTLALT------LDKQ-LEPALKQFSKWGVDFVMTDFINR-------- 413 Dyadobacter ...
Q8A2Z2          374 --------E----DYIKELCSYAKERNvkiIVWTWASC------AREN-PSDWIAKMHSYGVSGAKIDFFER-------- 426 Bacteroides ...
5HQ4_A          401 kngiarhewhDGQFMVNEYLHNVKLAAKHKISINTHEPIKDTGLRRTYPNWITREGARGQEFNAWGt--pPNPPEHISML 478 Pseudoaltero...
jgi:AciPR4_1547 447 ----------DDQEGIQFFYDVARYAAEHHLMVDFHGCHTPWGLMRAYPNVMGYESVLGLENNKVGrr-dS--PVDRAVF 513
WP_012376026    438 ----------DGQETVKWYADVLAAAARYKLMVDLHGAYKPTGLARTWPNYITQEGVLGNEYnkipwkpgACSTLHTITL 507 Opitutus terrae
WP_013534164    421 ----------DDQQMVAFFHEMMRASARHRLMLNLHGAYRPTGLQRTWPQYITQEGVLGAEYNKWs---rRITPAHNVTL 487 Pseudoxantho...
Q9AA15          432 ----------NDQQMVDFYHRLLSKAGEHQLMVDLHGAYRPTGLVRTYPHYVTQEGVLGAEYNKWs---rRITATHNVTL 498 Caulobacter ...
Q8P619          417 ----------DDQQMVDFYHRLLAKAAEHKLLVDLHGAYHPTGLIRTYPNYLTQEGVLGAEYNKWTt---RITATHNLTL 483 Xanthomonas ...
jcvi:PRU_0270   398 ----------NDQTAVEMAERLAKTCAEYKLFVDYHGFYTPTGMNRTYPNILNYEGVFGMEEARWAkk-eTDMPRYDVTF 466
3_pfamImport    122 ----------DDQTAVEMVYRIAEMTARYKLTLDLHGIYKPTGINRTYPHIINFESVFGMEEVKWTdi-kNNMPLYDVTF 190
WP_015810814    414 ----------DDQKAVQFFYKIAEACARHKIMLMFHGAFKPAGFNRTFPHAVAREAVLGSEYNMWSak-aT--PEHNVLL 480 Dyadobacter ...
Q8A2Z2          427 ----------NDQIAMRWGKEFAERLAEKQMVAIFHGCPVPTGLHRTYPNILNYEAVRGAECNFWEk---TLTPEYHTRF 493 Bacteroides ...
5HQ4_A          479 AFTRMLAGPMDFTPGIFDLSFNgl----gaN--TNRPQTTLAKQLALYVVLYSPIQMAADLPKNYlakp-dafqFIQDVP 551 Pseudoaltero...
jgi:AciPR4_1547 514 AWTRLLVGPMDYTAGGFDNQTEdsf---vaRnaTPQVMGTRAQQLALYVVYENPIPMVSDSPQNYdgeaapafqFLKDVP 590
WP_012376026    508 PFTRGLLGPMDFTPGGFLNRTPae----fkItqPAEVIGTRARQLAMTVVYFSPLLVLCDSPENYrgqp--gveFFRGLP 581 Opitutus terrae
WP_013534164    488 PFTRMLLGPMDYTPGGFRNTTPeaf---qvRfkGPEVMGTRAHQLAMYVVYDSPLQMVADSPDVYvdap--gadFIRLVP 562 Pseudoxantho...
Q9AA15          499 PFTRMLLGPMDYTPGGFRNVAPkdf---ksQfiLPTVQTTRGQALAMYVVYDSPLTMVSDSPITYaasp-agldFISAVP 574 Caulobacter ...
Q8P619          484 PFTRMLLGPMDYTPGGFRNVRPaaf---kpQhiAPQVMTTRAQQLAMYVVYESPFAVVSDSPEQYenvp--aaqFLRDVP 558 Xanthomonas ...
jcvi:PRU_0270   467 PFIRMMAGSVDFTPGAMRNGTKhnw---veCyqNPVSMGTRCHQLACYVMHDSPFTMLCDAPTNYereq-ecvdIITSIP 542
3_pfamImport    191 PYIRMMAGPVDYTPGAMRNATKadw---raMyyTPASMGTRCHQLAAYIVHDSPFTMLCDAPTNYlneq-ecvdFIASLP 266
WP_015810814    481 AFIRMLGGPLDYEPGMLNNATPkgf---hpMpeNVMSLTTRTQQLAMFVVYESPIQFFAGNPSQGlkep-gfmeLLGSIP 556 Dyadobacter ...
Q8A2Z2          494 PFIRLLAGPADYTPGSMRSVTQdefrpmdiDntPPMSMGTRSHELSMFVIYDQWMAYLCDSPTEYnkyp-dvldFLSKVP 572 Bacteroides ...
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