8OR0,8OR2,2DO7,3O6B,6V9I,3TDU


Conserved Protein Domain Family
Cullin_Nedd8

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pfam10557: Cullin_Nedd8 (This model is not part of the current CDD release)
Cullin protein neddylation domain
This is the neddylation site of cullin proteins which are a family of structurally related proteins containing an evolutionarily conserved cullin domain. With the exception of APC2, each member of the cullin family is modified by Nedd8 and several cullins function in Ubiquitin-dependent proteolysis, a process in which the 26S proteasome recognises and subsequently degrades a target protein tagged with K48-linked poly-ubiquitin chains. Cullins are molecular scaffolds responsible for assembling the ROC1/Rbx1 RING-based E3 ubiquitin ligases, of which several play a direct role in tumorigenesis. Nedd8/Rub1 is a small ubiquitin-like protein, which was originally found to be conjugated to Cdc53, a cullin component of the SCF (Skp1-Cdc53/CUL1-F-box protein) E3 Ub ligase complex in Saccharomyces cerevisiae, and Nedd8 modification has now emerged as a regulatory pathway of fundamental importance for cell cycle control and for embryogenesis in metazoans. The only identified Nedd8 substrates are cullins. Neddylation results in covalent conjugation of a Nedd8 moiety onto a conserved cullin lysine residue.
Statistics
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PSSM-Id: 519444
Aligned: 320 rows
Threshold Bit Score: 48.222
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8OR0_A       743 DRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKP-RVPVIKKCIDILIEKEYLERVDGE 805 human
XP_006687167 733 NRDTEIRSVIVSIIKVDTKILFTDLINKAIETVSKKGPV-SIQDIKSNIEFLITKEYITRDTDN 795
XP_002616492 722 NRDPEVRAALVRTMKQSKSILYAELLANVLHTMEQRGTSlSVHTVKEGIEYLISNEYIRRDADG 785
CCE89009     714 NRDTEIKCILVRIMKQEKSVLYSDLIYQTLEHAQAKGPC-DVSDIKTQLDYLIANEFVKREPDG 776
Q6BUS5       715 NRSVEFRSALVRVMKSAKRISYLDLLTQTLPLVEKNGPC-TIADLKSNLEYLIENEFVKRELDG 777 Debaryomyces hansenii
EMG47832     739 NRDEEFKSCVIKIMKQERELNIVNLLNQSIAMLERRQPV-NITNLKTIVENLIQMEFLKRDDNN 801
XP_002549970 767 NRDEEFKSCIVKLMKQEKQLDIHDLLNRSITFLQKKQSV-DFSRLKVIIEKLIETEYLKRDDND 829
XP_007372700 681 NRQEEYKATIVKVMKQHEKYSMTNLLQDCLDLLHKRNPTaSVHDLKACIDVLITNEYLKRQDQD 744
XP_001527145 837 NRVEEYKSVLMRILKQESSLDVSDLLNRAIEILQARRPV-YVTQLNECLENLIEQEFLARSGSN 899
XP_036663524 784 NRTEEFKSVIVRIMKQAKTLQMTNLLNQSIEILQKRRPV-SIIDLKAVIEKLITDEFLRRRNRD 846
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