Conserved Protein Domain Family
ORF6C

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pfam10552: ORF6C (491252 is an unknown moldel)
ORF6C domain
This domain was identified by Iyer and colleagues.
Statistics
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PSSM-Id: 491252
Aligned: 12 rows
Threshold Bit Score: 118.212
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q81A80       125 VLKLTFAALEGHTQQIQEIKSEVKGLR----ENTPLYAIECEEITRAVKSLGVMLLGGKNSNSYQDIGLRRKLYRDIYSQ 200 Bacillus cereus...
WP_012103644 129 QLRLQYQVIEQHEEKINELDIKVESLA----LTMNISDGQAKTIQKLVNKRVKALCYGDESSAYMNTSIRKKVYSYIWRT 204 Clostridium klu...
WP_011722270 118 QLKLQYEVIEEHEEKLSSIETKVNKLE----NSMTIDYAQQEELSSLARKIVVQALGGKNTPAYKELN--KKAFSTLWRD 191 Clostridium novyi
Q833C7       113 NTELLLEAALKHERGLTLVNQRLDKLE----TETTINRSQQRKIQGLVSSTVIKVLGGKKTLAYQDSSIKQSAFSNCYKQ 188 Enterococcus fa...
CDA11227     128 AIFTLDEKQKKADEKIAAVAEDLKDFK----ENAPLFNIECEELQKALRAKVISEMGGKKSAAYNDKSLRTKVFSDAQRQ 203
1_pfamImport   1 ------RAILMLDNKTIEIEEKVTNLE----NNIPLFNVECKELQALVRKIGIKTLGGYKTPAYNDRSLRTKVYTDIQHQ 70 
4_pfamImport   1 ELRMHYRALEEHSQEIQEVKAEVADLK----DNMPLFNVECKEIQSLVKKTGTKVLGGYKSNAYNDNSLRGKVYSDIQKQ 76 
3_pfamImport   1 AIIYSMTELKQIKSRQDHTEEEMNKMKllvdNELWLTEQHKGSVQRKVKQRVFEL---------KKEGYDNASYQGIYGA 71 
Q8DXH4       115 AFIALFTGQKKLKEHQLALAQDVDYLK----NEQPIHPSFAQALLKKRKARVVSCLGGMDSPAYADKVFAQSVFRQAEVD 190 Streptococcus a...
2_pfamImport   1 AFIQLFQTQKEIKKEQAVMRDDIVYLK----EEQPVNPSINQDLTKERNKAVVKCLGGYDAPAYSDSKLRQKVFWQAAKD 76 
Q9CGS9       123 QIALLAQGNVNLNKKVEQIENSVLDLT----DRFGLPSNKAKVLQKKVASKVYMFTGGKYSNAHKKLG--AKVFREFYKD 196 Lactococcus lac...
WP_014641900 116 QLMASMKLSIEHDETLEQHDSRLTHLE----ETMRIDGAEEHRIKKKANAKIMEVIGGKKAPAYGELS--RHVFSTFWRD 189 Halobacillus ha...
Q81A80       201 LHREFGVNSYKAIKRYHLDRAIQMInEEYSIPTVLNEEI 239 Bacillus cereus ATCC 14579
WP_012103644 205 LKDYLNVTVYHNILRKDYSSALKYI-NAITLQGALLREV 242 Clostridium kluyveri
WP_011722270 192 FKRIMQVNSYKNTSVKQFYRAKDLI-NNWKPNRELELMI 229 Clostridium novyi
Q833C7       189 LKALFDVASYVDIPKVRYEEAVALI-PRWKPNLELQARI 226 Enterococcus faecalis
CDA11227     204 IKREFGLTSYKAIKRSQFNKALEII-ENYKMPFVLREII 241
1_pfamImport  71 LKREFGVTRYEAIKRKQLDKAKEIL-VSYTVPVYLKEEI 108
4_pfamImport  77 LRREFGVEKYEAIKRSQFDVAKQIV-DEYKAPTVLIQEI 114
3_pfamImport  72 LKRHFGVAKYDKIPRKYYQNAMRFI-AGWYPPERPNTLD 109
Q8DXH4       191 FKDHFNINRYDMLPKKFAEAALSYW-MTWEPSTNTKMKI 228 Streptococcus agalactiae serogroup V
2_pfamImport  77 FKELFKIPRYDLLKKKDIDRAYDYW-KQWQPQTNLRLEI 114
Q9CGS9       197 LNNRFDVVKYSDIPLSRYDEATEYL-DMWQPSFNTTLEI 234 Lactococcus lactis subsp. lactis
WP_014641900 190 FKNHFTIPRYGDLPKKQFEEGLRFI-EFWQPDTSLRMEI 227 Halobacillus halophilus
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