5JNO,4IX7,4X0G,7V9G,7V9H,7YUL


Conserved Protein Domain Family
BEN

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pfam10523: BEN (This model is not part of the current CDD release)
BEN domain
The BEN domain is found in diverse animal proteins such as BANP/SMAR1, NAC1 and the Drosophila mod(mdg4) isoform C, in the chordopoxvirus virosomal protein E5R and in several proteins of polydnaviruses. Computational analysis suggests that the BEN domain mediates protein-DNA and protein-protein interactions during chromatin organisation and transcription. The BEN domain-containing protein 3 (BEND3) is shown to interact (via BEN domains 1 and 3) with ERCC6L (via N-terminal TPR repeat and SNF2 HeliC region of ERCC6L) which stimulates the ERCC6L translocase and ATPase activities.
Statistics
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PSSM-Id: 519432
Aligned: 40 rows
Threshold Bit Score: 38.1071
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5JNO_A         30 DLACRLLVQLFPElfs--dvDFSRGCSACGFAAkr-------kLESLHLQLIRNYVEVYYPsVk------dTAVWQAECL 94   human
EFX70064      390 QAIYKLLDELYSF-------EYMEIHKKTEKDAtkgts-lkiaMDPNELKEIRDTMMNLYP-TmkcgkgklSTIVEKNIT 460 
Q98204        656 ELAVLLLHKVFQElfdarqlRRCYSCYGDGRth---------cLDPARLQLIRHCVALCFP-Sms-----dDGEWVRECV 720  Molluscum con...
6_pfamImport    1 ELACRLLVQLFPElft--veDYNRNCNACGIvsk-------kkLDSLHLQLIRNYVEVCYP-Lvk-----nGSVWQVECL 65  
Q98204        829 NFAVRMLVYMFPElftaenlHTHFNCYGSmgk---------rrLDPLRLRLLRHYVQLLHP-Aar-----nERVWITKFL 893  Molluscum con...
Q98204        957 HFAAQLTVMLFPElfsscteRQKFSCAGSdeh---------lrLDPVRVRLIRHYVRAVCL-Pga-----fERTWEAECV 1021 Molluscum con...
Q08FV7        320 DLTEKIIKKKF---------DYIFKNRMNEKYRfyfdg-nhigLNQIKIMQIYNKIKLFVD-Hn------dDELVFNSFV 382  Deerpox virus...
Q9Q8R5        302 DLTEKLIKTTFPE----------VVKSGEGHNYrcypdgthqgLDPERVIDMCYKARVATD-Se------sVVDVHNAIV 364  Myxoma virus
P21606        251 ELVEKVLKILFRDlfksgeyKAYRYDDDVEngf--------igLDTLKLNIVHDIVEPCMP-Vr-------RPVAKILCK 314  Vaccinia viru...
7V9G_A         24 NFAARLLVRLFPElfttenlRLQYNHSGacn---------kkqLDPTRLRLIRHYVEAVYP-Vek-----mEEVWHYECI 88   house mouse
5JNO_A         95 PQLNDFFSRFW 105  human
EFX70064      461 NKMNKTLKNPD 471 
Q98204        721 SRVNSELTGEE 731  Molluscum contagiosum virus subtype 1
6_pfamImport   66 PQINDFFNRFW 76  
Q98204        894 ACLDERCRRRC 904  Molluscum contagiosum virus subtype 1
Q98204       1022 PSIDARCQQPG 1032 Molluscum contagiosum virus subtype 1
Q08FV7        383 YSVDMCLSTPR 393  Deerpox virus W-848-83
Q9Q8R5        365 ETVNRFLIRSE 375  Myxoma virus
P21606        315 EMVNKYFENPL 325  Vaccinia virus WR
7V9G_A         89 PSIDERCRRPn 99   house mouse
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