6LXH,2VR3,4B60


Conserved Protein Domain Family
SdrG_C_C

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pfam10425: SdrG_C_C 
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C-terminus of bacterial fibrinogen-binding adhesin
This is the C-terminal half of a bacterial fibrinogen-binding adhesin SdrG. SdrG is a Gram-positive cell-wall-anchored adhesin that allows attachment of the bacterium to host tissues via specific binding to the beta-chain of human fibrinogen (Fg). SdrG binds to its ligand with a dynamic "dock, lock, and latch" mechanism which represents a general mode of ligand-binding for structurally related cell wall-anchored proteins in most Gram-positive bacteria. The C-terminal part of SdrG(276-596) is integral to the folding of the immunoglobulin-like whole to create the docking grooves necessary for Fg binding. The domain is associated with families of Cna_B, pfam05738.
Statistics
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PSSM-Id: 431277
Aligned: 10 rows
Threshold Bit Score: 110.204
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6LXH_A        159 GNKKAQPLIS----STNYINNED--LSRNMTAYVNQPKNTYTKQTFvtNLTGY---------KFNPNAKNFK-------- 215  Staphylococcu...
Q2G0L4        397 VVNEKNSIGSafteTVSHVGNKEnpGYYKQTIYVNPSENSLTNAKL--KVQAYhssypnnigQINKDVTDIK-------- 466  Staphylococcu...
Q2FUY2        367 DKPNGANISS----QIIGVDTASgqNTYKQTVFVNPKQRVLGNTWV--YIKGYqdkieessgKVSATDTKLR-------- 432  Staphylococcu...
2VR3_A        157 GKFYNLSIKG----TIDQIDKTN--NTYRQTIYVNPSGDNVIAPVLtgNLKPNtds----naLIDQQNTSIK-------- 218  Staphylococcu...
4B60_B        157 IGNYYANLNG----SIETFNKAN--NRFSHVAFIKPNNGKTTSVTVtgTLMKGs--------NQNGNQPKVR-------- 214  Staphylococcu...
Q2G1T5        291 RDNWGVTANG----RIDTLNKVD--GKFSHFAYMKPNNQSLSSVTVtgQVTKGn--------KPGVNNPTVK-------- 348  Staphylococcu...
WP_012290214 4232 eggnTPNMTS----KIVSFDRET--GEFVQYYYINRDKTLTKSAEFeyTPSEA--------------VTNLKfdyyalrq 4291 Finegoldia magna
WP_011953364  220 ANDMFLGISS----RMMHFDKDQ--QLFEDIIYVNPAQKDLNHAYIvfNTSDLveel--snaVVKPSTMRVE-------- 283  Limosilactoba...
Q8DYL7        475 HTNVKTNVRS----RIMKLDDER--QTETYITQINPEGKEMYFASGlgNLYTIigsdgtsgsPVNLLNAEVK-------- 540  Streptococcus...
Q5HRI6        389 NENRTANLQS----MFTNIDTKN--HTVEQTIYINPLRYSAKETNV--NISGNgde----gsTIIDDSTIIK-------- 448  Staphylococcu...
6LXH_A        216 ----IYEVTDQN-------QFVDSFTPD---TSKLKDVTDQFD------------VIYSNDNKT-ATVDLMKGqtssNKQ 268  Staphylococcu...
Q2G0L4        467 ----IYQVPKGY-------TLNKGYDVN---TKELTDVTNQYLq-----------KITYGDNNS-AVIDFGNA----DSA 516  Staphylococcu...
Q2FUY2        433 ----IFEVNDTS-------KLSDSYYADp-nDSNLKEVTDQFKn-----------RIYYEHPNV-ASIKFGDI----TKT 484  Staphylococcu...
2VR3_A        219 ----VYKVDNAA-------DLSESYFVN---PENFEDVTN--Sv-----------NITFPNPNQ-YKVEFNTPddqiTTP 270  Staphylococcu...
4B60_B        215 ----IFEYLGNNe------DIAKSVYANttdTSKFKEVTSNMSg-----------NLNLQNNGS-YSLNIENL----DKT 268  Staphylococcu...
Q2G1T5        349 ----VYKHIGSD-------DLAESVYAKlddVSKFEDVTDNMS-------------LDFDTNGG-YSLNFNNLd--qSKN 401  Staphylococcu...
WP_012290214 4292 nsgnIYDYNKGQyvdpivkDMPESFGVDe-nSYNLNWYYT--Dg-----------YYNLGAGQT-QKISLGTLg--kDNS 4354 Finegoldia magna
WP_011953364  284 ----IYRNSRGL-------KLPQSYGVN---LQRLRDITNRFPvvegdhlveapyTMSFADNK--MRLNFGADq--tNDS 345  Limosilactoba...
Q8DYL7        541 ----ILKTNSK--------NLTDSMDQNy-dSPEFEDVTS---------------QYSYTNDGSkITIDWKTNsissTTS 592  Streptococcus...
Q5HRI6        449 ----VYKVGDNQ-------NLPDSNRIYd--YSEYEDVTN--Dd-----------YAQLGNNND-VNINFGNI----DSP 497  Staphylococcu...
6LXH_A        269 YIIQQVAYPDNSSTDNGKIDYTLDTDKTKYSWSN-----SYSNVN 308  Staphylococcus aureus
Q2G0L4        517 YVVMVNTKFQYTNSESPTLVQMATLSSTGNKSVStg--nALGFTN 559  Staphylococcus aureus subsp. aureus NCTC 8325
Q2FUY2        485 YVVLVEGHYDNTGK---NLKTQVIQENVDPVTNRdy--sIFGWNn 524  Staphylococcus aureus subsp. aureus NCTC 8325
2VR3_A        271 YIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRS------MSWDN 309  Staphylococcus aureus
4B60_B        269 YVVHYDGEYLNGTD-EVDFRTQMVGHPEQLYKYYydrgyTLTWDN 312  Staphylococcus aureus subsp. aureus NCTC 8325
Q2G1T5        402 YVIKYEGYYDSNAS-NLEFQTHLFGYYNYYYTSN------LTWKN 439  Staphylococcus aureus subsp. aureus NCTC 8325
WP_012290214 4355 LILKVTGKVKAENIASYDTYAKMYGYYTEKWTDY------YGYSH 4393 Finegoldia magna
WP_011953364  346 YIIRVVGQYNDELDGTVRLRARLFGMDQQNVYMS-------NSTA 383  Limosilactobacillus reuteri
Q8DYL7        593 YVVLVKIPKQSG-----VLYSTVSDINQTYGSKY-----SYGHTN 627  Streptococcus agalactiae serogroup V
Q5HRI6        498 YIIKVISKYDPNKDDYTTIQQTVTMQTTINEYTGef--rTASYDN 540  Staphylococcus epidermidis RP62A
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