1N67,4B60,2RAL,3AU0,4MBO,6LXH


Conserved Protein Domain Family
SdrG_C_C

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pfam10425: SdrG_C_C (This model is not part of the current CDD release)
C-terminus of bacterial fibrinogen-binding adhesin
This is the C-terminal half of a bacterial fibrinogen-binding adhesin SdrG. SdrG is a Gram-positive cell-wall-anchored adhesin that allows attachment of the bacterium to host tissues via specific binding to the beta-chain of human fibrinogen (Fg). SdrG binds to its ligand with a dynamic "dock, lock, and latch" mechanism which represents a general mode of ligand-binding for structurally related cell wall-anchored proteins in most Gram-positive bacteria. The C-terminal part of SdrG(276-596) is integral to the folding of the immunoglobulin-like whole to create the docking grooves necessary for Fg binding. The domain is associated with families of Cna_B, pfam05738.
Statistics
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PSSM-Id: 519372
Aligned: 16 rows
Threshold Bit Score: 107.888
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1N67_A        172 GKFYNLSIKG----TIDQIDKT--N--NTYRQTIYVNPSGDNVIAPVLt--gNLKPNtds----naLIDQQNTSIK---- 233  Staphylococcu...
Q2FUY2        367 DKPNGANISS----QIIGVDTA--SgqNTYKQTVFVNPKQRVLGNTWV----YIKGYqdkieessgKVSATDTKLR---- 432  Staphylococcu...
Q2G015        373 GKFYNLSIKG----TIDQIDKT--N--NTYRQTIYVNPSGDNVIAPVLt--gNLKPNtds----naLIDQQNTSIK---- 434  Staphylococcu...
WP_012290214 4232 eggnTPNMTS----KIVSFDRE--T--GEFVQYYYINRDKTLTKSAEFe--yTPSEA--------------VTNLKfdyy 4287 Finegoldia magna
Q8DYL7        475 HTNVKTNVRS----RIMKLDDE--R--QTETYITQINPEGKEMYFASGl--gNLYTIigsdgtsgsPVNLLNAEVK---- 540  Streptococcus...
Q5HRI6        389 NENRTANLQS----MFTNIDTK--N--HTVEQTIYINPLRYSAKETNV----NISGNgde----gsTIIDDSTIIK---- 448  Staphylococcu...
Q2G0L4        397 VVNEKNSIGSafteTVSHVGNK--EnpGYYKQTIYVNPSENSLTNAKL----KVQAYhssypnnigQINKDVTDIK---- 466  Staphylococcu...
2RAL_A        173 NENRTANLQS----MFTNIDTK--N--HTVEQTIYINPLRYSAKETNV----NISGNgde----gsTIIDDSTIIK---- 232  Staphylococcu...
3AU0_A        165 DKPNGANISS----QIIGVDTAsgQ--NTYKQTVFVNPKQRVLGNTWVyikgYQDKIees----sgKVSATDTKLR---- 230  Staphylococcu...
4MBO_A        166 HTNVKTNVRS----RIMKLDDE--R--QTETYITQINPEGKEMYFASGl--gNLYTIigsdgtsgsPVNLLNAEVK---- 231  Streptococcus...
1N67_A        234 --------VYKVDNAA-------DLSESYFVNp--ENFEDVTN--SvNITFPNPNQ-YKVEFNT--PddqiTTPYIVVVN 291  Staphylococcu...
Q2FUY2        433 --------IFEVNDTS-------KLSDSYYADpndSNLKEVTDqfKnRIYYEHPNV-ASIKFGD--I----TKTYVVLVE 490  Staphylococcu...
Q2G015        435 --------VYKVDNAA-------DLSESYFVNp--ENFEDVTN--SvNITFPNPNQ-YKVEFNT--PddqiTTPYIVVVN 492  Staphylococcu...
WP_012290214 4288 alrqnsgnIYDYNKGQyvdpivkDMPESFGVDensYNLNWYYT--DgYYNLGAGQT-QKISLGT--Lg--kDNSLILKVT 4360 Finegoldia magna
Q8DYL7        541 --------ILKTNSK--------NLTDSMDQNydsPEFEDVTS----QYSYTNDGSkITIDWKT--NsissTTSYVVLVK 598  Streptococcus...
Q5HRI6        449 --------VYKVGDNQ-------NLPDSNRIYd-ySEYEDVTN--DdYAQLGNNND-VNINFGN--I----DSPYIIKVI 503  Staphylococcu...
Q2G0L4        467 --------IYQVPKGY-------TLNKGYDVNt--KELTDVTNqyLqKITYGDNNS-AVIDFGN--A----DSAYVVMVN 522  Staphylococcu...
2RAL_A        233 --------VYKVGDNQ-------NLPDSNRIyd-ySEYEDVTN--DdYAQLGNNND-VNINFGN--I----DSPYIIKVI 287  Staphylococcu...
3AU0_A        231 --------IFEVNDTS-------KLSESYYADpndSNLKEVTDqfKnRIYYEHPNV-ASIKFGd------iTKTYVVLVE 288  Staphylococcu...
4MBO_A        232 --------ILKTNSK--------NLTDSMDQNydsPEFEDVTSq----YSYTNDGSkITIDWKTnsIs--sTTSYVVLVK 289  Streptococcus...
1N67_A        292 GHIDPNSKGDLALRSTLYGYNSNIIW---R---S----MSWDN 324  Staphylococcus aureus
Q2FUY2        491 GHYDNTGK---NLKTQVIQENVDPVT---N---RdysiFGWNn 524  Staphylococcus aureus subsp. aureus NCTC 8325
Q2G015        493 GHIDPNSKGDLALRSTLYGYNSNIIW---R---S----MSWDN 525  Staphylococcus aureus subsp. aureus NCTC 8325
WP_012290214 4361 GKVKAENIASYDTYAKMYGYYTEKWT---D---Y----YGYSH 4393 Finegoldia magna
Q8DYL7        599 IPKQSG-----VLYSTVSDINQTYGS---K---Ys---YGHTN 627  Streptococcus agalactiae serogroup V
Q5HRI6        504 SKYDPNKDDYTTIQQTVTMQTTINEY---T---GefrtASYDN 540  Staphylococcus epidermidis RP62A
Q2G0L4        523 TKFQYTNSESPTLVQMATLSSTGNKS---V---StgnaLGFTN 559  Staphylococcus aureus subsp. aureus NCTC 8325
2RAL_A        288 SKYDPNKDDYTTIQQTVTMQTTINEY---TgefRt---ASYDN 324  Staphylococcus epidermidis
3AU0_A        289 GHYDNTGK---NLKTQVIQENVDPVTnrdY---Si---FGWNN 322  Staphylococcus aureus subsp. aureus N315
4MBO_A        290 IPXQSG-----VLYSTVSDINQTYGS---K---Ys---YGHTN 318  Streptococcus agalactiae NEM316
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