Conserved Protein Domain Family
TAF8_C

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pfam10406: TAF8_C 
Transcription factor TFIID complex subunit 8 C-term
This is the C-terminal, Delta, part of the TAF8 protein. The N-terminal is generally the histone fold domain, Bromo_TP (pfam07524). TAF8 is one of the key subunits of the transcription factor for pol II, TFIID. TAF8 is one of the several general cofactors which are typically involved in gene activation to bring about the communication between gene-specific transcription factors and components of the general transcription machinery.
Statistics
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PSSM-Id: 402158
View PSSM: pfam10406
Aligned: 114 rows
Threshold Bit Score: 31.7179
Threshold Setting Gi: 597978053
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CDS39373                 171 APAHllLPPLPEPHTYLDSKVTRPpPAQGLASLRR--QVIDQRRQMQLSLTSY 221 Echinococcus multilocularis
CCK71399                 179 IPAW--LPKLPPNHTYKFTTEYNK-LLNDEKVLKE--KIIKESMEIEVSLSNL 226 Kazachstania naganishii CBS 8797
XP_001729254              80 VPDH--LPPEPPRHCWMFTPVYATeVLSDMPALQLvnRKLDNARLVESSLRKL 130 Malassezia globosa CBS 7966
XP_003038183             213 VPSY--LPKLPPKHTYLKSPPTSTqQRSQTMPSLE--KKLKTASLVQDSLRHL 261 Schizophyllum commune H4-8
CCA68786                 250 VP-Y--LPSYPPKHTYIRSPPSPP-QRSSLTANLD--KRMQNTAKVRAALKNL 296 Serendipita indica DSM 11827
EMD41116                 194 lPHY--IPALPPKHTYLRTPIAPPkKAA--LPSLE--KKLQNAGLVQESLKSL 240 Gelatoporia subvermispora B
XP_007329061             234 lPPY--LPQLPPKHTYLQTPASPPkKAA--LPSLE--KKLKTAGLVQESLKNL 280 Agaricus bisporus var. burnett...
WGS:AACS:CC1G_00074      238 LPSY--LPPLPPKHTYMKTPASPPkKAA--LPSLE--KKLKTASLVQKSLQNL 284 Coprinopsis cinerea okayama7#130
EXX75142                 146 VPSH--MPPFPAKHSYKKTPVYPKlNIHNPIKLRE--MKLKEVKLVEKSLYKL 194 Rhizophagus irregularis DAOM 1...
WGS:AAFB:cds.EHI_184680A 124 IPGF--LPPLPDARTYKNTPIYQK-RHTDGISLRK--EELKVRHLNEDALINL 171 Entamoeba histolytica HM-1:IMSS
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