8IOI,1YG2,5X11


Conserved Protein Domain Family
Vir_act_alpha_C

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pfam10400: Vir_act_alpha_C (This model is not part of the current CDD release)
Virulence activator alpha C-term
This structure is homo-dimeric, and the domain here is the C-terminal half of the structure, often associated with PadR upstream, (pfam03551), which is a transcriptional regulator.
Statistics
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PSSM-Id: 519353
Aligned: 173 rows
Threshold Bit Score: 33.304
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8IOI_A        108 DIAVKLRGAGYGDVAALYTQVTALRAERV-------KSLDTYR----GIEKRT--------FADpsaldGAALHQYLVLR 168 Mycobacterium ...
WP_015391697   98 ELLLKMYLSTDKNSEEMRKHIIKFKEEAE-------GKLELFKlfdaDLKQNIemhnnh-------------knilcVLN 157 Clostridium sa...
WP_014396434  100 ELLLKLFFGAQVGPEDSLAQVERSRAEAE-------GLLAALR----LIDENVsq----arSGD-----PEFAYQHLSIR 159 Corallococcus ...
WP_015390466   99 EFLLRIFLSKDIPIEVMKEKIKKVKEKCE-------EELKQYS----EIENILstk--lqnVDK-----KSTILYLSTVN 160 Clostridium sa...
CCY40553       96 EFLMKVFFAENLPPQQAITMLRAYADGCR-------AWLRSMD----SVPQSIedy--gklTDA-----SAPVYWAFTAQ 157
WP_012862067   97 TFLMKIFFSDQKNIKENIEMFRAYKKKCL-------SELKNLE----KANNNIkfys-ereEEK-----GKSIYWNLTVL 159 Sebaldella ter...
WP_012860247   97 EFLMIIFFLNELPKEEALRILEEYKEQCM-------KEKDSLM----DANETVqtfkdiysVNK-----KDHIFWQLTVK 160 Sebaldella ter...
WP_235825053  108 PLCMKVFFSGELPKEENIERLREIKNEAQ-------QAIERYS----SVFETMkiyk-gmvARP-----EDSVYWNMTVE 170 Acetivibrio th...
23_pfamImport   4 PLLIKIFFSGNLGIDQTMRLLEKYIQSCA-------QIIEDMN----ADINKIsefe-aqiEQK-----DESFFWSMTMT 66 
WP_014357521   98 PFLVKLFFSGAIDTASNVEMMKQFRRCCEyalekikETLEHFR----KKDEGN----------------QNSVYWEMTAS 157 Acetobacterium...
8IOI_A        169 GGIRAEESAIDWLDEVAEALQ 189 Mycobacterium tuberculosis H37Rv
WP_015391697  158 LGIRQTKLYVDWSNEMLELLN 178 Clostridium saccharoperbutylacetonicum
WP_014396434  160 AGLLGLEAHLRWCDEAREALQ 180 Corallococcus coralloides
WP_015390466  161 YGVKMEEAQIKWCEEILKKLE 181 Clostridium saccharoperbutylacetonicum
CCY40553      158 FGRNYAQMCIAWAEDCIKRLE 178
WP_012862067  160 FGEKHLKTSLEFADEAIKILE 180 Sebaldella termitidis
WP_012860247  161 HGELCYEACLKWADYAIEVIK 181 Sebaldella termitidis
WP_235825053  171 YGIRYMKMLSEWCDCCIKILE 191 Acetivibrio thermocellus
23_pfamImport  67 YGFMYYQNEIKWANWCIDKLK 87 
WP_014357521  158 FGYYYYEMCILWANDTIKKLE 178 Acetobacterium woodii
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