2M9V


Conserved Protein Domain Family
TPP1

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pfam10341: TPP1 (This model is not part of the current CDD release)
Shelterin complex subunit, TPP1/ACD
TPP1 is a component of the telomerase holoenzyme, involved in telomere replication. It has been demonstrated that TPP1 dimerizes and binds to DNA and RNA. Furthermore, TPP1 stimulates the dissociation of RNA/DNA hetero-duplexes. Yeast telomerase protein TPP1 (Est3 in yeast) is a novel type of GTPase. The key residues in yeast Est3 are an Asp at residue 86 and the Arg at residue 110. The Asp is totally conserved in the family, whereas the Arg is not so well conserved. The N-terminal of TPP1 is likely to be the binding surface for TINF2, whereas the C-terminus probably binds to POT1, thereby tethering POT1 to the shelterin complex. The complex bound to telomeric DNA increases the activity and processivity of the human telomerase core enzyme, thus helping to maintain the length of the telomeres. This domain is conserved from fungi to mammals, hence family Telomere_Pot1 has been merged into the family. The human shelterin complex includes six proteins: telomere repeat binding factor 1 (TRF1), TRF2, repressor/activator protein 1 (RAP1), TRF1-interacting nuclear protein 2 (TIN2), TIN2-interacting protein 1 (TPP1) and protection of telomeres 1 (POT1).
Statistics
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PSSM-Id: 519322
Aligned: 38 rows
Threshold Bit Score: 81.2687
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2M9V_A          7 LQPWIKALIEDNSEHDQy----HPSGHVIPSLTKQDLALPHMSPtil---tnPCH-FAKITKFYNv-----CDYKVYASI 73   Saccharomyces...
XP_040018634    9 LSPWIESLILGYGE--------QREESHGGQL--------------------KAR-VIEVGDISKsqdvgsEGPAGLLFL 59  
6_pfamImport    1 LTPWIENLILSYGSG-------DESGSQL-----------------------RAH-VIGVGQMTQsqargsDGPTGLLFL 49  
XP_003170215    4 LKDWIEPLVEQAFRQSVdt--eAQKKPSCRELGKTIDDGSNFRTpv-----kRPK-YTQLLEWLP------KTPTPQAVL 69  
XP_002849514    4 IRSWIEPLVEAAIRQSI-----DAEESSSKELGETVNDESNFRIpv-----kRPK-CAQLVKWLA------KEPVPRALL 66  
XP_002791639    4 LRPWIVLVVEAALCLCLgqplpDKLPLRNPLQLVED------DNkvrv-rvkDRK-IVQVAQWSP------PSQSIQGTL 69  
XP_001537470    4 MRKWIAPLVEAALCSYLgepfpDEAALRNSLKLVEDDNTLRVRVg-------DQK-LVQVAQWSP------DPEPIRGTL 69  
XP_002542805    4 MKDWVHAYVHEAISLGLdg--pPNNRRIRAKLTNQGNDGTCCRVrv-----rGPQ-VAQIIQWED------HQSRLRAVL 69  
XP_003853578    6 LNPWIADFVKNEIEAVLawadrKKVKSFVKLENDGRFSDDGSNFrnavsslePEKdQLQLIKVLA------AGNTVNAVL 79  
EER23046        4 MDKWIHPHIQRALCLCLddlpdDKDSRQNPKLSEPRDDGKYFRVgv-----fGSQ-VVQVVKWQD------SSSPIEALL 71   Coccidioides ...
2M9V_A         74 RDSSHQILVEFSQECVSNFE--RTHNCRITSETTNCLMIIGDADLVYVTNSRAMs-hFKISLSNISSKEI---VPVLNVN 147  Saccharomyces...
XP_040018634   60 SDGLLQIPAILTKSAWEHLQ--QEEDRECFTSLVNTTVCVHDYQLQFHMASEKTkcrFVLSIRELATTATg--PVKGSAL 135 
6_pfamImport   50 SDGELKIPAVLTASAWEQLQ--EKEDRECFSSLLNTTVCLQDYRLRFHMDPEQTksrFFLSVGELATTAAg--PVKDNTP 125 
XP_003170215   70 SDGHTCIRARFSERVCQDFK--KENGSDIRSNPTPCLLRLSKLEITIAQLYTSPp-eITLYIDEIKVEGCv-kEGVFGNP 145 
XP_002849514   67 SDRFTKIHAIFSESSCLNYD--RENNSDFRKTLTGCILKISKFYITIGQSRTAPp-eISLYIEGMKVEGCe-gDGICGSP 142 
XP_002791639   70 SDSLTTILGIFSKESTQRYQ--IKARKPLNSGTKGAILKIVEFEVVISYVRAQTp-qIALYVLDFQVEGCe-gASVFGTP 145 
XP_001537470   70 SDSVTTISSVFSRESTEIFL--KKARKRLTNNTRGAIIKINEFDIVISYARAHSp-eISLFILDFRVEGCe-gSSIFGSP 145 
XP_002542805   70 SDSVSSIRGHFSDDAVAKYR--RENKSDIRAGTKGAVMKLANFDILITNQSHAVs--VALDIRGFEIIGCe-gAGAFGNP 144 
XP_003853578   80 SDGQTCIKARLSDNAVEIFEsaLDDGEQLDLEVTGDVIRLKSFTIVTTAFGSEE---DYIQLTVEDIDYChhlRKLVGDP 156 
EER23046       72 SDSCTTIRGHLSNDAVAKYR--LERKTDVRANTRGALMKITDFEIVINKKKTPAp-sLALYIRSFDILGCe-gTGTFGNP 147  Coccidioides ...
2M9V_A        148 -QATIFDIDQVGSLSTfpfvYK 168  Saccharomyces cerevisiae S288C
XP_040018634  136 -CSTALPSIRRKICVTrkalLG 156 
6_pfamImport  126 -CCTSSASVRMKICRTwrslLG 146 
XP_003170215  146 -RNVVHSKAILKISDKwvgeRR 166 
XP_002849514  143 -INILHHKAVIELGNRwareKR 163 
XP_002791639  146 -VDILGQPTISSLLRDfcrqHK 166 
XP_001537470  146 -VDVSGNSRLSSLARKcsrkCI 166 
XP_002542805  145 -HEISKSRVILALAREwlstGN 165 
XP_003853578  157 vSVEKDPRIRPLIDRVikslVP 178 
EER23046      148 -RDISSFPAISALAGQcqsiRA 168  Coccidioides posadasii C735 delta SOWgp
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