Conserved Protein Domain Family
Ilm1

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pfam10311: Ilm1 
Increased loss of mitochondrial DNA protein 1
This is a family of proteins of approximately 200 residues that are conserved in fungi. Ilm1 is part of the peroxisome, a complex that is the sole site of beta-oxidation in Saccharomyces cerevisiae and known to be required for optimal growth in the presence of fatty acid. Ilm1 may participate in the control of the C16/C18 ratio since it interacts strongly with Mga2p, a transcription factor that controls expression of Ole1, the sole fatty acyl desaturase in S. cerevisiae responsible for conversion of the saturated fatty acids stearate (C18) and palmitate (C16) to oleate and palmitoleate, respectively.
Statistics
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PSSM-Id: 431212
Aligned: 49 rows
Threshold Bit Score: 126.155
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_003236905   4 ISSKTYIRLHALFQVVLAVYLTFARESVGGPELVYKVRDKLRIDILQPFNLPR-SPFAYCGILLLSFAIFDLTLAik--- 79 
XP_002560159   4 ISSKTLIQAHAVFLVVIAGYLVKNPEVITDSDLVFMMGEALKIDF-PSLSSPQqSPFTFCAILIFIESLVDLVLLsnipf 82 
XP_049967852   4 LSSKTLIQAHAVFTVVIAGYLLKNPAVITDSDIVFMMGEALQIDF-PAPTTPTsSPYVICSVLLFVAAAVDIVLLtslpf 82 
XP_002148929   4 LSSKTLIQAHALFTFILSVYLVISPNAITDSDIIFIIGEAMQIDLDPAMTTFQ-YPLAICAILLTGEALVDLIIVrk--- 79 
XP_002485252   4 LSSKTLIQLHALFMFILAVYLITSPSSITESDLIFIIGEAMQIDLDPAMSTSQ-FPFSICAILLVSEALIDLIVVgk--- 79 
1_pfamImport   1 FSSKTLIKAHAFFLFVLAVYLTKSPEVITDSDLVFILGEAMKIDVSPTFARPQ-SPFALCGILLVADALVDLIVVtk--- 76 
2_pfamImport   1 LSSKTLIQAHALFLFVLAVYLTRSPEVVTESDLVFMLGEFLNLEATPSISRPQ-SPFALCGVLLVVDALVDLILVtk--- 76 
XP_001819286   4 LSSKTLIQAHALFLFILAVYLTRSPEVITDSDVVFMLGETLQIDAAPSLSRPQ-SPFALCGILLVADALVDLILVtk--- 79 
4_pfamImport   1 LSSKTLIQAHALFLFVLAVYLTRSPSTVTNSDVVFMIGEVLQIDAAPSFSRPQ-SPFALCGILLIADALVDLIVIak--- 76 
XP_001272585   4 LSSKTLIRAHALFLFVLAVYLTKSPEAVTESDFIFMVGEMVQIDAAPTLSRPQ-SPFAMCGILLIADALVDLIILsk--- 79 
XP_003236905  80 lpTLNHVLAVAEFIHRQqlrqqqerqqrefllqsrassssssstalpppvisrsrlpytrppasrssstsstastdsdss 159
XP_002560159  83 heALDEALPYIRPLRNGnlpaedlqvlqslpey----------------------------------------------- 115
XP_049967852  83 hdALNDALPYIRPLRNSnlpaedlqalarlpey----------------------------------------------- 115
XP_002148929  80 lpQIDDILSTVQHEQRRtedtgfsritlqkpkqni--------------------------------------------- 114
XP_002485252  80 lpQLDSILTNLQREQRQtedrgfsritlqkpkqti--------------------------------------------- 114
1_pfamImport  77 vpQINEVLARADVARSRsngstavisnnpfa------------------------------------------------- 107
2_pfamImport  77 ipQINEILAMAQAARVQspipvagavrtnpfm------------------------------------------------ 108
XP_001819286  80 vpRINEIIAMAEIARSAaptsiagamrtnpfl------------------------------------------------ 111
4_pfamImport  77 ipLVNELVAMAQAARSQsatsrssalqnpfa------------------------------------------------- 107
XP_001272585  80 vpWINEIIAMAQAARSEsavpvpgamrhnpfl------------------------------------------------ 111
XP_003236905 160 tstelneaalkitaefsslyrqlcillITLRSWIFMIVSLQIYLSSDMEWGAastalpstatvagmpatstlaantmatp 239
XP_002560159 116 ------------itksltiywsvwiavAACRFAVYAAIAFFIYQ------------------------------------ 147
XP_049967852 116 ------------itksltmywniwvavSAVRFALYGALSFYIYQ------------------------------------ 147
XP_002148929 115 ---------naltiqlatlyneiwtfiACVRFCFFFAVSLFIYTSGGNA------------------------------- 154
XP_002485252 115 ---------nswtiqlatiyneiwtfiAGARFVFFFAVSLFIYTGDS--------------------------------- 152
1_pfamImport 108 -------------irmaalyseiwtllAASRFCLFFAVSIFIYQSKPVAWGVg--------------------------- 147
2_pfamImport 109 -------------arltslyseiwtllSAARFCIFFAVSFFIYQSQPSAWGM---------------------------- 147
XP_001819286 112 -------------arlaslytdiwtllSASRFCLFFAVSFFIYQSKPSDWGV---------------------------- 150
4_pfamImport 108 -------------arlaalysdiwtllSAARFCLFFAVSFFIYQSRPDAWGVg--------------------------- 147
XP_001272585 112 -------------arlaslyseiwtllSAVRFCLFFAVSFFIYQSKPDAWGV---------------------------- 150
XP_003236905 240 fqsaagktilwldqnmhftRDGPSTAAAlsgsalGYDVIDLKRKIVLGYGVLELMFSCWILFALRHEKKQA 310
XP_002560159 148 -------------------GKGDHLASSytsaaaIGGLDRLKNRVVFSFAFFEMMFWFWTFSTLREERQER 199
XP_049967852 148 -------------------ARGSYMVASyaaktaPTGLAQLKSRVVFTFAFMEMMVWFWVFFTCREERQQR 199
XP_002148929 155 -------------------GKASLEWSDddagqiKLGLEQVKSRVVFTYAFVEMMFWLWTLSNVREERREV 206
XP_002485252 153 -------------------SGATGKKSWvgqgqvRNGLDQVRNRIVFTFAFVEMMFWLWALSNVREERREV 204
1_pfamImport 148 ------------------aSEA------------MSGLDQLKNRVVFTYGFMEMMFWLWILLTLREERQET 188
2_pfamImport 148 -------------------DAATGMGNYgtagaaTSGLDQLKNRVVFTYGFMEMMFWLWIFITLREERQEA 199
XP_001819286 151 -------------------DVRHTVDGYgqe--saSGLNQLKNRVVFTYGFMEMMFWLWIFLTLREERHEI 200
4_pfamImport 148 ------------------aGAARTTGGYgsg-eaTSGLDQLKNRVVFTYGFMEMMFWLWIFITLREERQEI 199
XP_001272585 151 -------------------NVTARGTEYsst-eaLSGLDQLKNRVVFTYGFMEMMFWLWIFITLREERQEI 201
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