Conserved Protein Domain Family
RTP1_C2

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pfam10304: RTP1_C2 (This model is not part of the current CDD release)
Required for nuclear transport of RNA pol II C-terminus 2
This domain is found towards the C-terminus of required for the nuclear transport of RNA pol II protein (RTP1). RTP1 is required for the nuclear localization of RNA polymerase II. This family is found in association with pfam10363.
Statistics
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PSSM-Id: 491073
Aligned: 57 rows
Threshold Bit Score: 31.6125
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002052661  847 MLLPIYRLLRAIEANESCDpQMRQHAANGLKILNE 881 
XP_016291084 1005 LLDRLKQVAAYVEAGDTDS-IVRTHAHDCIEHVDA 1038
XP_002569001 1054 NIPVMLRTLRFVEGSEEDG-LARGNLRALIESLEA 1087
XP_049968720 1007 SIPRMLRTLGFVESVETDG-IVRGHLRALTESLEA 1040
Q0CV08       1002 NIPYMLHSLHFVEGRETDS-IVRGHIRVLVESLEA 1035 Aspergillus terreus NIH2624
Q5BAH4       1001 NIPFMLRTLAGVEARETDP-IVRGHCRVLTESLEA 1034 Aspergillus nidulans
XP_001240095 1060 NVPDILRALNFVESRETDT-IVRGHLRALIESLEA 1093
XP_002145306 1087 NIPSILNTLRYVESQETDV-VVRGHVRVLVENLET 1120
XP_003175981 1034 NIPDILRVLAFVESEETDV-LVRGHVRALTESLEA 1067
XP_002847397 1042 NIPDILRVLNFIESKETDM-IVRGHVRILIESLEV 1075
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