Conserved Protein Domain Family
RTP1_C2

?
pfam10304: RTP1_C2 (This model is not part of the current CDD release)
Required for nuclear transport of RNA pol II C-terminus 2
This domain is found towards the C-terminus of required for the nuclear transport of RNA pol II protein (RTP1). RTP1 is required for the nuclear localisation of RNA polymerase II. This family is found in association with pfam10363.
Statistics
?
PSSM-Id: 519309
Aligned: 57 rows
Threshold Bit Score: 31.234
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_002052661  847 MLLPIYRLLRAIEANESCDpQMRQHAANGLKILNE 881 
XP_016291084 1005 LLDRLKQVAAYVEAGDTDS-IVRTHAHDCIEHVDA 1038
KAJ5828281   1065 NIPVMLRTLRFVEGSEEDG-LARGNLRALIESLEA 1098
EPS32939     1043 SIPRMLRTLGFVECVETDG-IVRGHLRALTESLEA 1076
Q0CV08       1002 NIPYMLHSLHFVEGRETDS-IVRGHIRVLVESLEA 1035 Aspergillus terreus NIH2624
Q5BAH4       1001 NIPFMLRTLAGVEARETDP-IVRGHCRVLTESLEA 1034 Aspergillus nidulans
XP_001240095 1060 NVPDILRALNFVESRETDT-IVRGHLRALIESLEA 1093
XP_054117341 1080 NIPSILNTLRYVESQETDV-VVRGHVRVLVENLET 1113
XP_003175981 1034 NIPDILRVLAFVESEETDV-LVRGHVRALTESLEA 1067
XP_002847397 1042 NIPDILRVLNFIESKETDM-IVRGHVRILIESLEV 1075
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap