Conserved Protein Domain Family
Tmp39

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pfam10271: Tmp39 (This model is not part of the current CDD release)
Putative transmembrane protein
This is a family of conserved proteins found from worms to humans. They are putative transmembrane proteins but the function is unknown.
Statistics
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PSSM-Id: 519288
Aligned: 10 rows
Threshold Bit Score: 480.79
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5U2V9        42 AIGLPVPPTtALITPGPVRHCQIPDLP-VDGSLFFEFLFFIYLLIVLFIQYINIYKTVWWYPYNHpaSCTSLNFHLIDYY 120 Norway rat
XP_005317795  48 GTGLSSPPL-ATQTVVPLQHCKIPELP-VQASILFELQLFFCQLIALFVHYINIYKTVWWYPPSHppSHTSLNFHLIDFN 125
Q6DF19        47 STGLSSPPL-ATQTVVPLRHCKIPDLP-ADRHLLFELQLFFCHLIALFVHYINIYKTVWWYPPSHppSHTSLNFHLIDFN 124 tropical clawed...
1_pfamImport   1 STGLSSPRL-AAQTVVPLQHNKIPELP-MEKSVLFELHLLFCHLIALFVHYVNIYKTVWWYPPSHppSHTSLNFHLIDYN 78 
Q7ZW11        48 GTGMSSPPL-ATQTVVPLKHCKIPELS-MDKNVLFELHLFACHLIALFVHYVNIYKTVWWYPPSHppSHTSLNFHLIDYN 125 zebrafish
XP_006639253  42 SVGLSAPPItALITPEPVRHSRIPELP-LDGSLLFEFLLFTYLLVALFVQYINIYKTVWWYPYSHpaASTSLNFHLIDYH 120
XP_032239220  64 SIGTVRQTIsSLLTIPQLYHIPIPRVP-IFNAMGFEILFFAYLVSALGLQYLNIYK---------------LNFHVVDVH 127
XP_003111226  15 ATVTVPPPRtSGVTLS--VHPIWPDIQfTQGELFFECTLFLYSVLALFLQYLNIYKTLWWLPKSY--WHYSLKFHLINPY 90 
XP_001959491  26 KPGQAQTPA----TAMP-KHIPFPDHA-TTSEWLSELIMCAFTMGSAIVQFINIYRTNWWLPQAH--TRHMVNIDLIDPH 97 
XP_002061090  29 GPNPSIMPI----SILP-KHIQFPDHS-STTECLSELIMSAFTMGAAIVQFINIYRTNWWLPQSF--TKHLVNIELIDPY 100
Q5U2V9       121 LAAFITVMLARRL---VWALISEATKAGAASMVHYT--ALILARL---VLLTLCGWVLCWTLVN--------LFRSHSVL 184 Norway rat
XP_005317795 126 LLMVTTIVLGRRF---IGSIVKEASQRGKVSLFRSI--LLFLTRF---TVLTATGWSLCRSLIH--------LFRTYSFL 189
Q6DF19       125 VLTLTTIVLARRL---IGAIVREASQGGKSSVPHSL--LLVATRF---AVLTGTGWSLCRSIIL--------LFRTHSFF 188 tropical clawed...
1_pfamImport  79 LLTFTTVVLARRL---VSAIVKQASQNGKVHLPQSV--FLVTIRF---VVLTGTGWSLCRSIIY--------LFRTYSVL 142
Q7ZW11       126 MLVFTVIVLARRL---IAAIVKEASQSGKLSFPHSV--FLVTARF---AVLTLAGWSLCRSLIY--------LFKTYSVL 189 zebrafish
XP_006639253 121 LATFITVMLARRL---VWTIISEASQTGPTSVVRYT--VLIAARL---TLLTLCGWVLCWTLVS--------LFKNHSVL 184
XP_032239220 128 LVTFILIFLSRRL---IWNILKQTLA--------SE--ILFTVKYflgLIFKAVIFLVVICTLTwll---wkLFQHNSIQ 191
XP_003111226  91 FLSCVGLLLGWRVtvcFWKTITEVIAAISANQSQFVqsSLMIVEY---AAIKTPVMTLIITSFLfsfnrvchDFPSRSVL 167
XP_001959491  98 LRYLLFILNTRRL---IYCLLL-IKIRKFDENTQNW--IRLGVKY---GFGGLVQLGLGFCAVK--------LYQQHTYI 160
XP_002061090 101 LRYFILILNTRRF---LYSVLV-VKWRH-----RYW--IRLGVKY---GFGGFVQLLLAYCAWR--------LYQKHSLL 158
Q5U2V9       185 NLLFLGYPFGVYVPLYCFHQDSRAhll--ltdYVVQHQAvEDaasnVGSLTR-SKDFLSLLLESLKEQf----NNSTPI- 256 Norway rat
XP_005317795 190 NLLFLCYPFGMYIPFLQLNCDLRKtnl---fsHMASVGPrEA----VSGLAR-SRDYLLTLRETWKQHtr-qlYGPEAM- 259
Q6DF19       189 NLLFLCYPFGMYIPFLQLGWDFRRpg----lsHMPNTRD-------LASMDRgSKDYLHVLQHILRHHm----PSAEPL- 252 tropical clawed...
1_pfamImport 143 NLLFLCYPPKVHLPHRQWYLAASPlgfstslrLTTVSIVqRMtpfcSAWLRSrNRLYF---------------------- 200
Q7ZW11       190 SLLFLCYPFGMYIPFFRLSCDFRRags---msPLSGIGSkDVg---AAALGRgGRDYLSVLKETWKQHts-qlYSAQPM- 261 zebrafish
XP_006639253 185 NLLFLGYPFGVYVPLCCFHQESRTqtlpadcgYLEQEQM-------DGPLLR-PKDFLTLLRENLREQf----NSPTSI- 251
XP_032239220 192 NCLFLLYPIVMYLCAFGFTLDPQG----------------NKvmfkISPHVEiSQIHLIPTRTMEKKAfqngdARQELI- 254
XP_003111226 168 WFLF---PVFFYVFIF----------------RSEIIGWlRKfreqVGKWGRkESDFSTICERLTESP-----PAQIDLd 223
XP_001959491 161 LLLFLSYPVIIYLFIFGFQLE---------------------------PFLR-TRFEL---------------PGVYINd 197
XP_002061090 159 LLFYLSYPVLVYLLIFGFQLE---------------------------PFLR-TRFEL---------------PGVYINd 195
Q5U2V9       257 -PTHSCPLSPDLI-RNEVE---CLKADFNHRIKDVLFNS----------LFSAYYVAFLPLCFV-KST-------QYYDM 313 Norway rat
XP_005317795 260 -PTHACCLSPSLI-RSEVE---FLKMDFNWRMKEVLVSS----------MLSAYYVAFVPVWFV-KNT-------HYYDK 316
Q6DF19       253 -PTHACCLSPDLI-RSEVH---YLKLDFNWRVREVLLSS----------MLSAYYVAFVPVWFV-KST-------QYYDK 309 tropical clawed...
1_pfamImport 201 ----QISLTPAFCyRSKLNarlLLRLSLDFSFKNILGCSpikfeprilfLVECFVSSLCSPRFVgERT--------FYEM 268
Q7ZW11       262 -PTHACCLSPDLI-RKEVE---YLKMDFNWRMKEVLVSS----------MLSAYYVAFVPVWFV-KST-------QYVDK 318 zebrafish
XP_006639253 252 -PAHTCPLSPDLI-RNEVE---CLKADFNRRIKEVLFNS----------LFSAYYVAFLPLCFV-KST-------QYYDM 308
XP_032239220 255 -GKPNCTLPPDAV-RYEAE---CLRTDFNSRIKQVLFQS----------LLCAYFVGFLPMRFSeQHH-------VYYDL 312
XP_003111226 224 sVLHMCSDNPAQI-REEIQ---VLIDDLVLRVKKSIFAG----------VSTAFLSIMLPCIFVpYKTsqgipqkILINE 289
XP_001959491 198 mPVHSCTTNAVHI-RDEVE---TLRHDFNRRFKQLIFTS----------MLNAYYSGLVPCCLA--VS-------VQYNV 254
XP_002061090 196 lPVHSCTTNPQQI-REEIE---TLRHDFNKRFKQLIFTS----------MLNAYYSGLVPCFLA--MS-------INYNV 252
Q5U2V9       314 RWSCEHLIMVWINAFVMLTTQ--------LLPSKYCDLLHKSAAHLGKWQKL---EHGFYSNAPQHI---WSENTIWPQG 379 Norway rat
XP_005317795 317 RWSCELFLLVSISTSVILMQH--------LLPASYCDLLHKAAAHLGCWQKV---DPALCSNVLQHP---WTEECMWPQG 382
Q6DF19       310 RWSCELFLQVSLSTSVILTQH--------LLPARYCDLLHKAAAHLGCWQKV---DPALCSNMLQHS---WMEECMWPQG 375 tropical clawed...
1_pfamImport 269 YKMTTFCVLVIICKLRLLLASgaqdgdsvRHPASSPETEHKVMTSC---------------NTIKKClhrWSEEYMWPQG 333
Q7ZW11       319 RWSCELFILVSVSTSVILMRH--------LLPPRYCDLLHKAAAHLGCWQKV---DPSLCSNVLQHI---WTEEYMWPQG 384 zebrafish
XP_006639253 309 QWSCEHLIMVWINAFVMLMSQ--------LLPPKYCDLLHRSAAHLGKWQKL---EHGSYSNAPQHV---WSENTIWPQG 374
XP_032239220 313 WWACQQILFIWLSSLLVLMMY--------MLPLTYCDALHKCAVHLGGWERY---TCG-HRETP-HV---WSPLTVWPQG 376
XP_003111226 290 FWECQLGIVVGLTAFSLYVAY--------LSPLNYLDLLHRAAIHLGSWRQIegpRIGHTGSMISAPt-pWNEFCLYNDG 360
XP_001959491 255 IRAAQHCLGVCLGAFSLCAVF--------LYPAKYSDTLHRATLHLGCWQRI---GTVPVQLIAAANaptWSKYSSYGHG 323
XP_002061090 253 MRAAQHCIIVCLGAFSLSFVF--------LYPARYSDILHRATLHLGCWHRMdaaDPNPSQLILAANaytWSKYLIYPQN 324
Q5U2V9       380 VLVRH-SRCLYRAMGPYNV----AVPSDGSHARFYFLFHRPLRVLNLLILIEGSVIIYQLYSLLRSE-KWNHTLSMALVL 453 Norway rat
XP_005317795 383 VLVKH-SKNVYKAVGHYNV----AIPSDVSHFRFHFFFSKPLRILNILLLLEGAVIVYQLYSLMSSE-KWHQTISLALIL 456
Q6DF19       376 VLVKH-NKNVYKAVGHYNV----AIPSDVSHFRFHFFFSNPLRVLNILTTLEGVLIFYQLYSLLSSE-KWHHTISLALIL 449 tropical clawed...
1_pfamImport 334 VLVKH-NKNVYKAMGHYNV----AVPSDVSHFRFYFFFNKPLRILNILIILEGAVIFYQLYSLMSSE-KWHQIISLALIL 407
Q7ZW11       385 VLVKH-SKNVYKAMGHYNV----AVPSDVSHYRFYFFFNKPLRILNILIILEGAMIFYQLYSLMCSE-KWHQTISLALIL 458 zebrafish
XP_006639253 375 VLVRH-NRCLYKAVGPCNV----AVPSDVSHARFYFLFHKPLRILNLLILIEGSVVLYQLYSLLRSE-KWNHTLSLALIL 448
XP_032239220 377 VLVRH-NKLLYKGLGIHNV----AIPGDPHHSRFFFMFESPLRLINWMSASLLALVLYQLVLIIRCH-FWYQLLSVVGML 450
XP_003111226 361 ETVQMpDGRCYRAKASHLIrtvaAHPESSRHNTFFRVLQRPHYLINAMCTFEFVLIFIQFWMLVLTN-DWQHIVTFVLLM 439
XP_001959491 324 TVVKH-NGGLYRSHGVVTV----ATPGNTSHARFYKLFHNPTTIYSTLAILQAAVLLVEIGSLSAESvEWHFVLSISFVA 398
XP_002061090 325 TVVKH-NGGLYRSQGPVTV----AMPGNGSHVRFYKLFHNPTVIYSTLATLQAAVLLVEIASLSSTSiEWHFVLSISFVA 399
Q5U2V9       454 FCNYYVLFKLLRDRIVLGRAYS 475 Norway rat
XP_005317795 457 FSNYYAFFKLLRDRLVLGKAYS 478
Q6DF19       450 FSNYYAFFKLLRDRIVLGKAYF 471 tropical clawed frog
1_pfamImport 408 FSNYYAFFKLLRDRLVLGKAYA 429
Q7ZW11       459 FSNYYAFFKLLRDRIVLGKAYS 480 zebrafish
XP_006639253 449 FCNYYVLFKLLRDRIVLGKAYS 470
XP_032239220 451 SFNYVILYRILRDRWALQGVLA 472
XP_003111226 440 FANYLLFAKLFKDKIILGRIYE 461
XP_001959491 399 FTSMGAFFKLVRDYLITKDLYK 420
XP_002061090 400 FTSMGAFFKLVRDYLITKHLYK 421
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