7B9V,6ZYM


Conserved Protein Domain Family
Cir_N

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pfam10197: Cir_N (This model is not part of the current CDD release)
N-terminal domain of CBF1 interacting co-repressor CIR
This is a 45 residue conserved region at the N-terminal end of a family of proteins referred to as CIRs (CBF1-interacting co-repressors). CBF1 (centromere-binding factor 1) acts as a transcription factor that causes repression by binding specifically to GTGGGAA motifs in responsive promoters, and it requires CIR as a co-repressor. CIR binds to histone deacetylase and to SAP30 and serves as a linker between CBF1 and the histone deacetylase complex.
Statistics
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PSSM-Id: 519233
Aligned: 114 rows
Threshold Bit Score: 32.3877
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7B9V_F        11 SWNPKLMKNRKKVWETEQDLITEQQKLNTRLKEIEKE 47  brewer's yeast
XP_002676222  10 SFHPLNKQNQRKKWIAEQQEKAKRKLAEQRIKELADE 46 
XP_024369547  28 pWHPLSYPNQRRKWIAEQQNAQKERKAEEVAHEFAQq 64 
ERM94763      39 pWHPLSYPNQRRKWIAEQTDAQHHRRAQEVAREFAQE 75 
8_pfamImport   1 SWHPANKANQKHIWMAEQEAIKRREREQDKVKEVRK- 36 
XP_002897409  10 SWHPANKANQKRIWVAEQQAKAREERERQKAKEVRKa 46 
XP_020435706  11 SFHPGTKENQKKLFIAEQKASANEKRERERAKERQDE 47 
XP_004360442  10 SFHPTNKVNQKKLFIAEERSKTDRKKEEERSKQVIEE 46 
XP_003293681  10 SFHPGNKQNQKKLFLAEEKEKESKRKEEERAKEVLve 46 
Q54QA7        10 SFHPGNKNSQKKLFIAEEREKQLNKRENERAKEVLTE 46  Dictyostelium discoideum AX4
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