Conserved Protein Domain Family
Tmemb_40

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pfam10160: Tmemb_40 (This model is not part of the current CDD release)
Predicted membrane protein
This is a region of 280 amino acids from a group of proteins conserved from plants to humans. It is predicted to be a membrane protein but its function is otherwise unknown.
Statistics
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PSSM-Id: 519206
Aligned: 15 rows
Threshold Bit Score: 249.564
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_006354754  41 TACHGFWHDAALVLPSVLFVLYLGFHARSNIKKLSHRRSF-VMIGYYGLLWFAVLLNLGWCFLQVWQ--CTPGKQV-AWN 116
2_pfamImport   1 VECHGLWHNVLMIVPSVLFVLYLASQAKRSFSKVSNGRSH-VVAVLYAILWLVSIFNLAWCSLQAWE--CAPGKQF-MWS 76 
F4K2U8        30 DKCHGFLHNTVLVAASLFFVAYLAYEAKKSLSKLSNRRSY-IMIAYYGCLWLVSLLNLAWCCLQGWE--CTPGKEV-VWN 105 thale cress
XP_006837146  33 SQCHGLWYNIALIIPASLFLLFLLLQARKSLKKLSHGRSY-IMIVYYALLWLVAVLNLSWCLLQSWQ--CAPGKEF-AWN 108
XP_009407393  43 VGCHGLLYNLALIVPSVIFVAYLASLARKSFAKLTNGYSY-VMIAYYALLWLISVLNLLWCLVQAWQ--CSPEKEL-SWN 118
Q75J22        42 SGCHGTVYSLAVMLPSLAFVGFLAWQARRSFRRLSYGRSHvVVVAYYALLWAVAVLNLLWCFLQAWQ--CMPDRAF-SWN 118 Japanese rice
XP_002990992  58 NGQHGVLYYLVMLLPVLAFTVFLIARARKCVKKLLQSQSP-IMATYYACLWIISILNILWCVLEMK-----HSSST-SWN 130
XP_002499712  96 VASREVWFDVLVALPTVLFVMFLASHLRASVEKLRATRNH-VMATYYTNLWFVCILNLLRCGVQMWQ--ASPLNHVrLWN 172
Q18936        71 GGFRVRYWDAVILVPNILFLLFLILKCGSVIRKLRTGNSP-VLRAFTLLVYVSTLVNIIRCAYSMTLsmTDGLEQT-VDQ 148 Caenorhabditis ...
EDO39501      34 SGSWIRICDIVLLAPNAMFMVFLFYSLGLAHAKLVGTRCP-IVKTIYTLLLLYGIHYTL------------------NSQ 94 
XP_006354754 117 LLSLFATSAMLFLEISIVAFLL----KENYASCLETLARTFMISGLFVGVDLLLKAIF------------IFGFGVPLFl 180
2_pfamImport  77 VISLFTTSGMLFLEVSLIAFLL----QGNHASGREALTQTFLISAIVVGLDISLKGIY------------LFGFGIQLFd 140
F4K2U8       106 LLTLFTTSGMLFLEVSLVAFLF----QGNYASGAEALTRTFLISGFIVALDLLLKAIF------------LFGFGVPLFi 169 thale cress
XP_006837146 109 LLSLFTASGMLFLEVSLVAFLL----QGNHVSGLDALMRTLIISGIIIGVDFFIKAVC------------IFGFGLPLFi 172
XP_009407393 119 MLSLFTESGMLFLEVSLLAFLL----QGNHAGGLDVLTRTFVISGVIVAADTLLKAIY------------IFGFGVPLFa 182
Q75J22       119 VLSLFTKSGMLFLEVSLIAFLL----QGNETSGFESLARTFVISGAVVAADVLLKTIY------------VFGFGVSLFi 182 Japanese rice
XP_002990992 131 LISLLTRFGMVLLEVSVVVFLS----QGYLTSTWDALVRTLTFSGFVAAVDALIKAIL------------IFRFGIPLFv 194
XP_002499712 173 ALWLATRFGMDSLEVSAVVYLYlahgHSRAVGAAAALRETVVIAMGVAGIDLLAKSVL------------IFGFGVQVFv 240
Q18936       149 TLWIIIKFFYLTAEFCALTFGLlfghLDNGKSILIALLGTLLVSIPHTAVQVIIEMKIidnswlpltyfdIQSDGGFLF- 227 Caenorhabditis ...
EDO39501      95 AFWLLLRCLLLSVELSVIIFGVcaanLDSRSSVRRVLLFTSASAVLFTSAQAVLEFTQdgihspyggtynLFQHGGMIF- 173
XP_006354754 181 dmeiad-----rgkwgvWCTNKLFLTAAYGYILFVHFSKWRDK--LPPRPAFYNYVIVMFVTTAVMLFACGLAGIRGG-F 252
2_pfamImport 141 vsnng-------sqwalWVIHKLLLTGVYGLIFFMYRSTWRER--LPARPAFQNYISIMFCVNATALLACALAAHGTG-F 210
F4K2U8       170 dnneng----ktfkwglWIIHKLLLTGVYGMVFLMYNSRWREK--LPARPAFYNYIIIMFALYSLYLVASAFTANNAH-F 242 thale cress
XP_006837146 173 dvsdtv----nhqkwglWVAHRLVLAAVYGFLLFMHHTKWRDR--LPARPAFYNYISAMFTLNAVSLLACGLIGVGAG-L 245
XP_009407393 183 dnneta----hqarwglWIVHKLLLTAVYGSIFFMHHSKWRER--LPARPAFYNYVCVMLLLNTMSLFGCLLAGNGAG-F 255
Q75J22       183 dvdqgt-----ggkwglWFLHKLVLTGVYGLIVFMYHSRWRDR--LPAKPAYYNYVCAMLLLNGISLFGCFLVATGAG-F 254 Japanese rice
XP_002990992 195 agsdag----dwskwsfWFLHSLVFSGVYFFILVLPFTRWRDH--LPARPAFYNYVLVLFVLNMSRSLGSFILGCGSE-F 267
XP_002499712 241 eepglhsrayfwakwgyWGARAFIAALVYGVLTALPRTRYRDW--MPARPSFYRYTGVLFVMYAVETVCALCVGGGVSrW 318
Q18936       228 -----------------WVFSSAVLALVYFFIMCLPLVCCQKYtkLPSKGSFLIYCMMMVVLNVLQSMGAALILFKSS-D 289 Caenorhabditis ...
EDO39501     174 -----------------WFASSMLFFVMYFSLLILPCISFGRRlrLPGKPSFYRYCGFLALINILQSIGSALIYYHIT-F 235
XP_006354754 253 GLWLYNLTVVCYHSLYLPFLYVTFLADFFKEE--------------------DWLLDSAYYS 294
2_pfamImport 211 GIWLYNITVICYHAMYLPLLYITFLADFLQED--------------------DLHLENVYYS 252
F4K2U8       243 GFWLYGIMSVCYHALYLPLLYITFLADFFQEE--------------------DLNLENVYYS 284 thale cress
XP_006837146 246 GFGLYNLVAICYHSLYPPLLYITFLADFFQEE--------------------DLHLEDVYYS 287
XP_009407393 256 GIWLSNLITVCYHSLYLPLLYVIFLADFFQEE--------------------DLRLENVYYS 297
Q75J22       255 GLWLYNLTSVCYHSLYLPLLYVTFLADFFQEE--------------------DMLLENVYYS 296 Japanese rice
XP_002990992 268 GYCIYSFTNYAYYAFYPPLLYLTFLADYFKEE--------------------AFQLEDVYYS 309
XP_002499712 319 AYCVFGLCNYAYYACYPPVLYLTFLADYFRED--------------------EYEVESRYYS 360
Q18936       290 GLCFVGVSTYVYFVLYPPIIYFTFLRKKLKTPpnntsglfmyrkhkdeqgsgD--LPDSYYP 349 Caenorhabditis elegans
EDO39501     236 GTCILDVTVFTYFALFAPLVYVTFLAEFMSSPsqtvlq----------lkrrrdYLPNLHTG 287
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