Conserved Protein Domain Family
Fy-3

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pfam10154: Fy-3 
Ferry endosomal RAB5 effector complex subunit 3
This entry represents a human Ferry endosomal RAB5 effector complex subunit 3 (Fy-3) and similar sequences from animals and some fungal species. Fy-3 is a component of the FERRY complex (Five-subunit Endosomal Rab5 and RNA/ribosome intermediary), which is involved in the localisation and the distribution of specific mRNAs most likely by mediating their endosomal transport. The complex recruits mRNAs and ribosomes to early endosomes through direct mRNA-interaction.
Statistics
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PSSM-Id: 490948
Aligned: 11 rows
Threshold Bit Score: 364.799
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5RD58        41 SHLHGRLMLLHSLPC--FIEKD--LKEA-LTQFIEEESLSDYDRDA----EASLEAVKSGEVDL-HQLASTWAKAYAETT 110 Sumatran orangutan
2_pfamImport   1 KELVARVMNYHDIPC--FVETG--LNNK-LKNFVDNERQNLHDDQA----ALLLQKIRDDPTLI-DHVADVVAEKYKNTW 70 
NP_001071257  41 SDLHGRIMLLHRIPC--FVETD--LKNR-LGSFIESETLADYDRDA----EAALQKLTSGEVDI-NKLTNLWAKAYSETT 110
EEC12362      42 keivFRLMQEEQLPC--YVEDD--LTTS-LSDFIAHETEQFFDQTS----STAIEKFQRDG-DV-EALTARWTRDFREAS 110
EFA10962      30 GELVHVLILKNNLPI--YVEKD--LAEN-LSQFVNDWSIKHNNEHT----ASLIDDARNDKTNI-DEITKEWEKLMREEM 99 
Q7QB80        38 AELSHQIVAVRMDPImkFLKADreLLPT-LQAFVERENQSFYDERD----ELLLDKFRHGSPDV-DGLALDTEKLYREEI 111 Anopheles gambi...
1_pfamImport   1 DELSHRIINGFNLPL--NVIEE--LSSE-LQKFVEKCTIDFYDCQT----VDAIESIRNESIEV-EDIVKYWEKAFQEET 70 
XP_002430569  41 REFTYRILYNNKIPH--YLFDD--VYSQ-LEKFVETETLRYYDEVA----EEKLKEFKNDDFDV-DSVVKYWEKLFKNET 110
XP_002118317  15 NELAHRLITAHNLPC--YLLGK--LQAS-LKEFVSSTLCQLQVDKA----EQSIHHLKQFGPDViKDISDHWCKCLQDEV 85 
Q54R54       250 lektkddldeiesfnsqqqQQQ--QQQQ-QQQTPQKQQPPPPQQTP----QQSQQSQPQSSGGIiDSIGQNLDKGVA--- 319 Dictyostelium d...
NP_001256329  49 EDWVGKLRAQ---PSgkFLDYE--GAKEaLRKFIYSETINHQNRRTisniECAVKKKREMGMPL-------FQPSRNRRL 116 Caenorhabditis ...
Q5RD58       111 LEHARPEEp---------SWDEDFADVYHDLIHS-PASETLLNLEHNYFVSISELIGERDVELKKLRE----------RQ 170 Sumatran orangutan
2_pfamImport  71 QEYAPPIS----------TQPNNFPLSYHYLIHS-PAMQILMQLEKKYHSAVAKLLSDKEQSLTKMCE----------RH 129
NP_001071257 111 LEHARPEEa---------SWDEDFASVYHELIHS-PASETLLNLEHNYFVSVSELISERDMELKKLQE----------RQ 170
EEC12362     111 LAEEE-------------TPDSRFPHMYHTLIHS-PALDTVLNLEHTYAVAVGDMVRERDETLGRLQK----------RQ 166
EFA10962     100 AEYGERRCa---------SDEELFATAYHKMVHS-PALETMLQLEHMYSKTVRAKTEEKNRCIQNLSM----------KQ 159
Q7QB80       112 LEFADRVGp---------TDEEIFAQSYHQLVHS-SLLPEILAKEREYARTIASLTTQMTQQITTMNT----------LH 171 Anopheles gambi...
1_pfamImport  71 FSFTDNKGp---------SNDQLFGTAFHKLAHSgPSLDAILHIEYGYAQAVQDIMSRKCRQVTSLTK----------TQ 131
XP_002430569 111 VEYCEPTGt---------TDEELFSMVYHKLVHS-GALESILKKEQMYGATATSLAHKRKKEIKELSEkqvfiyvkinKQ 180
XP_002118317  86 AHWSDHSNkrnavqsiqlDNGQSVAQVYHALIHS-PAMEAILQLEYTYASVVKEIVKQRNTELEQFEI----------QH 154
Q54R54       320 ------------------RASSFFSFGFNKKNNQtPPINSPPSTPQLSSDDPNNVNNNSNNNNNNNNNn---------NN 372 Dictyostelium d...
NP_001256329 117 LEPRRKPVv---------PFEEKFTYVVEQ--SSsENLLTLMRMEVFMKKQMTDMIRARNWEVDQLS-----------KQ 174 Caenorhabditis ...
Q5RD58       171 GIEMEKVMQEL-------GKSLTDQDVNSLAAQHFESQQD------------LENKWSNELKQSTAIQKQEYQEWVIKLH 231 Sumatran orangutan
2_pfamImport 130 RGEMSRACDHV-------GFEYTTEDVSILATKQLADTDR------------MQKHWEDNYRRLTEEQKQEYCDLVIRLA 190
NP_001071257 171 AVEMNKVMQEL-------GKTLCDQDVNTVAAQHFEAQQV------------LESKWASELKQVTGIQKQEYQEWVMKLH 231
EEC12362     167 TSEMERCVQQV-------GLTLTDRDINDIAARHFEETQAs----------rLMDQWDKRIGSLKQTQRKEFWEWVRTVH 229
EFA10962     160 TEEMNHAVDRL-------EQDMTESKINELVARHYEAHSL------------LKVKLTSELDTIKEAQRREYREWLMQML 220
Q7QB80       172 QEEIESKIKLL-------DISITPENINHMLAKQYGMQNM------------IRKQCESELESTRGHQKHEYRNWVTQHV 232 Anopheles gambi...
1_pfamImport 132 TEEMNYAMDGL-------NKYTTEDDINALALKHFDDQTL------------LQGKWNSRLDTLKQEQRTGYREWVMKTV 192
XP_002430569 181 NDEMTVAMQDLhsmtiesEIRVSEKDINDLAAKHFEEQCL------------TSGRLNSEVEALHQSQRKEYRAWLMAMY 248
XP_002118317 155 QQQLEIAIQ---------SGIASDRKVSRLAAQHMEELQF------------KNAKWNSTLSDLMENQKREFYAWMVRVY 213
Q54R54       373 TQSKPIGINNNnnnnssnNRQRTDSQVSPPNSLNSSSPNKppqpttplnnnnSNNNNNNNNNNNNSIQRKS--------- 443 Dictyostelium d...
NP_001256329 175 CEKLVAETG---------DPDMHPHKISMLNEKLRQ----------------VHTTYSFQVADLSDTQKSKYRKAVDSLY 229 Caenorhabditis ...
Q5RD58       232 QDLK-----------NPNNS-SLSEEIKVQPSQFRESVEAIGRIYEEQRK----------------LEESFTIHLGAQLK 283 Sumatran orangutan
2_pfamImport 191 EEMK-----------QSDNKlNENGPVHNEVQRLLDHNRGRSLVSTRDPSedvesessvtvscgilMEESFTINLGAQLK 259
NP_001071257 232 RDLQ-----------NPNNS-TINEEIKVQPGQLGEAGEAADRLFEEQRQ----------------LEESFTIHLGAQLK 283
EEC12362     230 EDYT-----------TSKGDrGFGARMRAASRSLAGHEVDNWTPPPPRPS------------------ESFTIHLGSQLK 280
EFA10962     221 EQNQ----------------------------ATSSLPTPNSPLTPHTPQpaiyssecarsidtpiLEESFTIHLGSQLK 272
Q7QB80       233 DESFlgq------seSPTQIgNRWSMISTQAPS---------------------------------MEESFTIHLGSQLK 273 Anopheles gambi...
1_pfamImport 193 EEMQgvdglyspignSPINIvTNGFTISNM--SLYD------------------------------MEESFTIHLGSQMK 240
XP_002430569 249 ENEAl----------SPTLHlTSTSPKVLDNSSLDSGISSQPEPWPH-------------------FEESFTIHLGSQLK 299
XP_002118317 214 NSMVenngvptertlS-----MPHSIVATLSRAAPDSHLNHESNNHVDNR----------------MEESFTIYLGTQKK 272
Q54R54       444 ---------------------STGSSSTNLQPTLQRKQSGGAGNIPIINSgss-----------ssKFEDFTIGVGVQKK 491 Dictyostelium d...
NP_001256329 230 SRGS-------------------------IPAELLDDVILDEHAIPRPVAtttgg-------yadgVNESFTIYIGSQLK 277 Caenorhabditis ...
Q5RD58       284 TMHNLRLLRADML-DFCKH--KRNHRsg----vKLHRLQTALSLYSTSLCGLVLLVD-NRINSYSGIKRDFATVCQECTD 355 Sumatran orangutan
2_pfamImport 260 TMHNIRLVVADML-YFCRY--SDDGEm------EAQRFQTAMSLYSNSLSAIVLITD-KNLNECSGIEKEFRTVCESSTE 329
NP_001071257 284 TMHNLRLVRSDVL-DFCKH--RRHSSsg----vKLRRLQTALSLYSTSLCGLVLLVD-NRVNSYSGIKRDFATVSQECTD 355
EEC12362     281 VMHNLRLLSANVL-DLCRHttyg------mgvpAPQRLQMAMSLHSNSLSGLVLLVD-NRINSYVGIKREFAAICHESTE 352
EFA10962     273 QMHNIRILSANVM-ELCAV--EDNDQss---epKPQLLQTALALYSSDLSGLVLMTD-NKIG--SRLTQDFQEICQRTTE 343
Q7QB80       274 HMHNIRILSTRVA-DLCSP--LYGDA-------SFGGPNVALGLYSSSLCGIVVLTPsGTITPDREIRRN----ANMSTE 339 Anopheles gambi...
1_pfamImport 241 STHNIRIMSADTL-NLLSLtlEENGTvv----hHPQRLQTVLELYSQDLKGLVLFIDtNNLDFYSGLAKEFFDICDGSTE 315
XP_002430569 300 QMHNVRILSANAL-DFCKIklPPEGVsh----vEPRRSETALSLYSSSLSGIVLLVDvGSFDGFAGLAKDFVDVCQQTTE 374
XP_002118317 273 TMHNIRLMIGHPL-DLCRS--AYTGSigsgigpPPQRIQTALSLYSSTLNGLILLVD-DKPNCYTGIKNEFAMICEESSE 348
Q54R54       492 KIFNFKLIEESPL-QLCRPitslt-----gdykKSKRVDYIKTLYSDSLSAVILIID-PSLQFNTENEKKFIKYCNMSTE 564 Dictyostelium d...
NP_001256329 278 SMHNVCLVTVDRLtDLCQTleg--------dwtTSSRLEMATKLYSRNLSGTTLLVP-RDPMMHINSSSDFFKICEQSTD 348 Caenorhabditis ...
Q5RD58       356 FHFPRIEEQLEVVQQVVLYARTQRRSKlkesldsgnQNGGNDDKTKNAERNYLN---VLPGEFYITRHSNLSEIHVAFHL 432 Sumatran orangutan
2_pfamImport 330 FHFETLQDQTTKVKEHALEASERRNRS---------LSSEETIEYKQNIDEMDGtgtLNEGDFYITKHSNLSQVHLVFHL 400
NP_001071257 356 FHFPRVDEQLEIVQQVVLYARAQRNSKqreq-pempRNGGNEDKNKILDRNSSN---ILQGEFYITRHSNLSEVHIVFHL 431
EEC12362     353 LHFADIDDQLETVRAKAREVAEIRTAAs--------LSGSDGSSSQSSRRSSFSgqdHSPGDFYVTRHSNLSEAHVVFHV 424
EFA10962     344 FHFPHIDDQLDKISNTAQLYLKSQKEN---------------------SNRNINselLQAGDFYITRHSNLAQVHVIFHM 402
Q7QB80       340 FHFEQIDRQIEKIQEDLRNLQHGHAVE---------AGGAQSLAAAAGRRPDRTvvtVKPGDAFITRHSNLSHSHVIFHL 410 Anopheles gambi...
1_pfamImport 316 FHFNSLQDQLEIIKSDLKVAVENRKCK---------GPVSNFLSPELQARRNKSk-lLQCGDVYITKHSNLASVHLVFHM 385
XP_002430569 375 FHFNNIESQLEAIKIQVKDAVQWRSEK------------AKNSSGYQNSKMSSGgksLQAGDLYITKHSNLSQVHVVFHL 442
XP_002118317 349 FHFLSHPEQLHHIRRSIQKSQSTRAKRq-------dSEDNDIDSLEIFWDEDDDsvvLALGDFYSTHHSNLSDIHVVYHL 421
Q54R54       565 LHFDSIDSQIHTFKQSLLKEEEREKEE---------------------NNNNNNnikLSNGDFFITKHSNLSDVQVVFHL 623 Dictyostelium d...
NP_001256329 349 LHFDSLAEQLKKTLAANRERNSWKADKideetskliAEGKTPPEQLVPSSALRQdptCTVGDVYITRHSNLHKVQIVYHL 428 Caenorhabditis ...
Q5RD58       433 CVDD----HVKS-GNITARDPAIMGLRNILKVCCTHDITTISIPLLLVH-DMSEEMTIPWCLRRAELVFKCVKGFMMEMA 506 Sumatran orangutan
2_pfamImport 401 VAEEnqlrTKASlTTVTSRHSVILGLRHILKVASSHDIRHITIPLLLSH-ELTEEITFQWCVKRAELVMKCIKGFMMEMA 479
NP_001071257 432 CVDD----NVRS-GNITARDPAIMGLRNILKVCCTHDITTITIPLLLVH-DMSEEMTIPWCLKRAELVFKCVKGFMMEMA 505
EEC12362     425 VGDE----SLRG-ADVGSRHPVILGLRNVLRVAHERDVCGVTLPLLLSH-ELYEEMTIPWCLRRAELVFKCIKGFMIEMA 498
EFA10962     403 VSDD----SLRG-SDINSRHPVVLGLRNILKTACSNDITSLTIPLLLQY-EMTEEMTISWCEKRAELVFKCVKGFMIEMA 476
Q7QB80       411 ISDE----TFQSpSEINSRHPVILGLRNILKIASRHDITTLTIPALLRH-EMSEDMTVSWCIRRAELVFKCAKGFMIESA 485 Anopheles gambi...
1_pfamImport 386 VIDD----SLKS-GDINSRHPVILGLRNILKTACSYDITMITIPLFLTH-EMTEDMTVPWCQKRAELVLKCVKGFMIESV 459
XP_002430569 443 LVDD----SVKN-SDVNSRHPVILGLRNILKTAASYDITTITLPLLLTN-EMSEGMTVAWCSKRAELVFKCVKGFMIEAA 516
XP_002118317 422 VVND----DVKS-DRLPNRHPILTGLRNALNTAASNDVTTITIPLLLVN-EMTEEMTISWCVKRAELIFKCVKGFMMENE 495
Q54R54       624 VIDSknrtPLGGdNQLSTTSDIAKGLRNILLTASKYGIGNITIPICLTEsELDLNVTNSNLLSRCVSVLSVTRASLTSLQ 703 Dictyostelium d...
NP_001256329 429 VVDE----TLQS-LEINSRHPCLAGVRNIIRTAARYNTSTIHIPLLLID-RPDESTTIAWCLKRAEMLFKCVKGYLMEVC 502 Caenorhabditis ...
Q5RD58       507 SWDGGISRT-----VQFLVPQSISEE--MFYQLSNMLPQIFRVSSTL 546 Sumatran orangutan
2_pfamImport 480 TWDGGISRT-----IQFVIPPGVSEE--AFDRLRYTLPEVFRTTSTR 519
NP_001071257 506 SWDGGISRT-----VQFLVPQSISEE--MFYQLSNMLPQIFRVSSTL 545
EEC12362     499 SLVGEETRT-----VQFLVPQGISED--LFASLSAMLSSIFRVSNPL 538
EFA10962     477 SWGGSELKN-----LQFMLPQGISSR--VFQSLTEMLPRIFKVSNPK 516
Q7QB80       486 SWGGAELNT-----LQLLLPHDISEE--LFRTLADMVPHVFRVANPK 525 Anopheles gambiae str. PEST
1_pfamImport 460 SLGGSELKT-----IQFLVPKGISEE--VFGILATMVPTIFRVSTPL 499
XP_002430569 517 GVGGADIIN-----LQFLVPSGISAE--VFSTLATMLPTIFRVCNPL 556
XP_002118317 496 MWSNNQACI-----VQFLIPKGISEE--MFNTFTGMLPGIFRMAAAL 535
Q54R54       704 EM--TSIKT-----VQFSLPSQLDSGntIFK---GPIAQKWKSAINP 740 Dictyostelium discoideum AX4
NP_001256329 503 --SGMDVESlphynVHFVLPSGLSPT--IYTAITNMFPSIFHLVPGV 545 Caenorhabditis elegans
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