5YMA


Conserved Protein Domain Family
Efg1

?
pfam10153: Efg1 (This model is not part of the current CDD release)
rRNA-processing protein Efg1
Efg1 is involved in rRNA processing.
Statistics
?
PSSM-Id: 519202
Aligned: 122 rows
Threshold Bit Score: 74.0842
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5YMA_A        52 IKKRARAIERLLaRdnLkLPANKQKELERELKAHKERIKD----IEFKRERSKXISKYHXVRFFERRKALRFAQQLERRl 127 Thermochaetoide...
EFJ32422      32 LGRQIRDIQRLLk---LnLSQEVRQAQESRLKQLKDN-HNpglqPSRVKVDRNISKRYKQVKFVERRKVERGLRRAEKEl 107
XP_006838876  43 LKNQIRSIERML-Lr-KnLPHEVKNAQEARLEELKKQKEI----ETRLALERKMSLRYRRIKFFERRKMERRIRRLEKLq 116
XP_009413918  38 VKNQIRSTERLLr---KdLPNEVRRAQEQKLNELKKQQEL----QTRLALEHKIRLRDRKIKFFERRKIERMIRRLEKQq 110
XP_002284076  35 LKNQIRSTERILr---KnLPPEMREAQEKKLEGLKKQQEI----HTRLAVERKIFLRDRKIKFFERRKIERRIRRLEKQq 107
KAH0634205    38 IKNQIRSVERMLr---KdLPPEIREVQKQKLEELKKQQEL----QNRLAVERKIFLRNRKVKFFDRRKIERRIRRLEKQq 110
EFH65757      38 LKNQIRSIGRMIr---KdLPPEVREALEKKLDDLKKQQDI----HIRLAVERKIFLRNRKVRFFERRKIERSIRRLEKLq 110
EFH39895      38 IKNQMRSVERFLr---KvSSFSLSEIRVPLIESLLKFQPFwrfaHTRLAVERKIFLRNRKIKFF-RRKIERSIRRLEKLq 113
EFH39323      38 IKNQMRSVERFLr---KdLPPEVRESLVEKLEDLKKQQDA----HTRLAVERKIFLRNRKIKFFERRKIERSIRRLEKLq 110
NP_001405708  39 LKNQIRSTERLLr---KdLPNDIRVAQEKKLEELKRQQEL----QNQLAIQRTVQLRDRKIKFFERRKIERMIRRLEKQq 111 Japanese rice
5YMA_A       128 -sKATDPVEIAQLKADLHIAQVDIDYTKYFPFXEPYVSL 165 Thermochaetoides thermophila DSM 1495
EFJ32422     108 -kNAPDEKSKDEAAAKLQQLKQDLEYIKFFPKSEKYVSL 145
XP_006838876 117 -rTTTDPHSEEQIARQLSKLREDLEYLRFFPKTEKYLSL 154
XP_009413918 111 -rASSDHVSDERILDQLSKLKEDLNYVRFFPKTEKYVSL 148
XP_002284076 108 -rAASGQAQEAEVAEQLSKLKEDLEYVRFFPKTEKYVSL 145
KAH0634205   111 -rTSSCKAQETEIAEQLAKLKEDLEYVRFFPKNEKYVSL 148
EFH65757     111 rsTSGGHVQDAEIGGQLNKLKEDLEYVRFFPKNEKYVSL 149
EFH39895     114 -rTSSAHVGDTDIAEQLSKLKEDLEYVRVLPEKREYVSL 151
EFH39323     111 -rTSSAHVGDTDIAEQLSKLKEDLEYVRFFPKNEKYVSL 148
NP_001405708 112 -rSNADDAS-----NKLSKLKEDLEYVRFFPKNEKYVSL 144 Japanese rice
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap