2VMK


Conserved Protein Domain Family
RNase_E_G

?
pfam10150: RNase_E_G (This model is not part of the current CDD release)
Ribonuclease E/G family
Ribonuclease E and Ribonuclease G are related enzymes that cleave a wide variety of RNAs.
Statistics
?
PSSM-Id: 519199
Aligned: 432 rows
Threshold Bit Score: 170.266
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2VMK_A               122 LAGSYLVLMpNNpRA-G-GISRRIEGd----DRTELKEAL-ASLeLPEg-----mGLIVRTAGVGKSAEALQWDLSFRLK 189 Escheri...
jgi:HIMB59_00008540  107 LTGKFINLLpYG-DE-I-ILSRRTRKnldtnQQDKIMDALsESE-V---------GLIARHNLIPENLEIAQAELQSLNQ 173
goetting:EAL2_c11600 108 LPGKYAVYLpLE-NV-V-KVSRSIESq---sERERLQAMG-ESI-TLGe-----fGLVIRTQGKDAELEDLKLDIQRLQA 174
35_pfamImport          1 VHGHYCFLS-TE-NTcL-GVSKKLSQe----ESKRLSALL-ENT-C-KdheaegyGLVFRTNAGAVLETELCEDIELVQK 70 
CDA25227             120 LHGHYCFLS-SE-NTtL-GVSKKI-Pq---eRAQEMIALA-NVY-C-KdheaegyGLVFRTNAQNVSEEELKQDIFYVQQ 189
CDA88454             117 FSGKYIVLS-AG-GErV-SVSRKIRDk---eVRQHLHELL-EPc-iDNtt----fGIIARTNSSKANDEELIAETQHLMK 184
34_pfamImport          1 LPGRYAVLT-RK-NGiVtSVSKKIQDe---dKRENLRCIL-QEy-aGEs-----yGFVARTNSASCEEMTFRGEIEGLVK 68 
40_pfamImport          2 LTGRFAVLT-HG-KSgI-QFSMKIRDe---nYKKEIGQKL-RVd-lQEsepdcnySLIVRTEAYHAEYQEILEEIHALQV 73 
WP_022089575         123 LTGKYCVLT-VG-NTnI-SISKKIQDk---tTRNQLTRIL-------DkykndeyGFIARTSAKDAKEQMIEGEIIDLIN 189 Eubacte...
WP_021953033         104 LSSDNLVMV-VG-GSgI-SISRKITDn---dTRNRLKSSL-SSL-DTGe-----yGFILRTSGADCSMEDILAQADLLKK 170 Eubacte...
2VMK_A               190 HWE-------AIKKAAe--SRPAPFLIHQESN--VIVRAFRDYLRQDIG-EILIDNPKVLELARQHI-AALGrPDFSSkI 256 Escheri...
jgi:HIMB59_00008540  174 QWKeielnakELSEEG---------LVFQNTY--FDQNFVCDYSDKNTD-QIIFSDHDRFEKVKSWD-EGLD-SSFAN-I 238
goetting:EAL2_c11600 175 AWE-------SIRQEGl--lGMGPKLIYQGYS--IAEQAAEAVLSGEVD-QLIVNDSGIYNEALSHL-KQAG-REVMSrV 240
35_pfamImport         71 EYR-------ALKKTGt--hQNAGDLVYRNLPgyLARLKAENF--EKTD-LVLTDGQDLYQEICAYLpHLVE-EKKV--- 134
CDA25227             190 CFA-------TIKTTGr--hGTTGNLIYRNIPgyMEKLKTQDLAEID---HIYTDQQDLYEEIRQYLpNLKE-QGi---- 252
CDA88454             185 RCQ-------DLIHTGr--hRTKFSCLYQAPS--GYLGSIRDLYEDKIQ-DVVTDSLEVYEQIQNFLkENAW-EDKLH-L 250
34_pfamImport         69 QYE-------QITKQGi--hRTVYSVLYRAAD--GYLSQIRDSLGGQST-GILTDDEELYAQIQTYLeAGGL-QDSMP-L 134
40_pfamImport         74 QYH-------KLIELAm--tRQKYYVLRRADH--PIAGFVRKALSERKEcEIVTDDSGIYEELQADAlTDSY-PDLS--I 139
WP_022089575         190 QLE-------EIKNKAmhlKGKS--IVKENES--ILTKECQEFIDKENG-IVITDKKQIFDELSKNK------------I 245 Eubacte...
WP_021953033         171 QYE-------DILRKFn--fSTSKALLFENNK--IVNACNE--FINKYSgEIKTDNENVYKFLTNSR------------I 225 Eubacte...
2VMK_A               257 --KLYtge-ipLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARatr-ggdIEETAFNTNLEAADEIAR 332 Escheri...
jgi:HIMB59_00008540  239 ceEMSpe---qIEENFNFEEKIDYLIGHQYSLPSGGNIMFGKTDALTAIDVNTGta---------krFDTNREAIQLIAK 306
goetting:EAL2_c11600 241 --ELFdks-sdIFDFFGIKKRIKSLSNRRIWLRSGGNIVFEKTEALTVIDVNTAKsik-gssAEDTIFKTNMEAAEEIAM 316
35_pfamImport        135 --QLYrddavsLSTLYHLRGNMQELLSSKVWLDSGANIIIESLETLTVIDVNSGKnr---srREEALFAINVEAAKEIAR 209
CDA25227             253 -lVKYddsavsLATLYHIQGNLDELLGQKVWLASGANIIIETLETLTVVDVNSGKnq---skKEETLFAINMEAAREILR 328
CDA88454             251 --SLWkeengkFDAVYDLSKTLDKALKQRVWLKSGAYLVIQPTEALVSIDVNTGKaiskkkdVEKTFLKVNLEAAKEIAI 328
34_pfamImport        135 --TLWdpdhgkMDAVYDISRTIEKVLRPKVWLRGGGYLIIQPTEALIAIDVNTGKaiskkkdVEKTFLKVNMEAVEEIAR 212
40_pfamImport        140 --RFYedallpLYKLYSLESLFEEIHARKVWLKSGAYLIIDYTEAMTVIDVNTGKces-gksKERTFLKINKEAALEIAR 216
WP_022089575         246 ncKFYnrd-lpLFKCYSLEKHLMSGINKKVWLNSGAYLIIEPTEALTVIDVNTGKael-ksnKEETFYKINIEAAHEVAR 323 Eubacte...
WP_021953033         226 saTYFtdtsisLCNKYALGKHLKNALSKKVWLKSGAYLVIEVTEALTVIDVNTGKaef-rsnKEKTFEKINLEAALEISK 304 Eubacte...
2VMK_A               333 QLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQ 390 Escherichia coli
jgi:HIMB59_00008540  307 LIKLKNISGKVVIDPV-ASDQNTLRKLVGMLKNEFRDDLSITNVYGYTRGGLLELSRS 363
goetting:EAL2_c11600 317 QIKLRDIGGIVLVDFIDMKSSQNKAALLGKMRACFASEHGKTKIYGFTELGIMEISRK 374
35_pfamImport        210 QLRLRNISGMILVDFINLKKKEQQQKLISVIREELQKDSVPANFIDITRLGLVELTRK 267
CDA25227             329 QIRLRNISGMIIIDFINMKSKEQQEALIQFVKQELKKDHVPASFIDITKLGLMELTRK 386
CDA88454             329 QLRLRNLSGMILVDFIDLHQEEYKEELLDRFRKELSKDPVPAQLIDMTKLGLVEITRK 386
34_pfamImport        213 QLRLRNLSGMILIDFIDMKDPEHKEKVLQALERATAKDPVQTTVVDMTALGLVEVTRK 270
40_pfamImport        217 QMRIRNLSGIIIVDFIDMKEEANVRELLDFTRQILRRDHVKAAAVDITRLHLMEITRQ 274
WP_022089575         324 QLKIRNISGIIIVDFISMRNKENEQILLNKMNEIFKYDYSRCIAVDITKLGLMEITRK 381 Eubacterium sp. CAG:156
WP_021953033         305 QLRIRNISGIIIVDFINMSKKESYQNLEDILKSYVDCDYVKCNIWGMTHLGLMEISRQ 362 Eubacterium sp. CAG:161
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap