Conserved Protein Domain Family
SCHIP-1

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pfam10148: SCHIP-1 (This model is not part of the current CDD release)
Schwannomin-interacting protein 1
Members of this family are coiled coil protein involved in linking membrane proteins to the cytoskeleton.
Statistics
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PSSM-Id: 490942
Aligned: 5 rows
Threshold Bit Score: 279.912
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_046648038   41 KRNDREEIRRRLAMGVEaEDGQ------ESDKGKRPSLQSRLQSGMNLQICFMNETADGGDIDNQKELLDNLKLGSPQS- 113 
2_pfamImport    1 RRNDREEIRRRLAMGAE-DDYFskivnpENRPIRKPSFQSRIKTGRNLQICFVNEAQSDTESVSSDSESCPTLSRLPRGn 79  
1_pfamImport    1 QKNERESIRQKLALGSFfDDGPgi--ytSCSKSGKPSLSSRLQSGMNLQICFVNDSGSDKDSDADDSK-TETSLDTPLS- 76  
EFN70358      947 RRNDREEIRRRLAMGPDaEDLR-------AERGRKPSLQSRLQSGMNLQICFMNETSSDTESPGSEND------TSPGSt 1013
EFA04405      114 RRTDREEIRRRLAMGSE-DDYY------TDRPGRKPSLQARLQSGMNLQICFMNETVSDTESPNSDNECPLTNPKQPKTc 186 
XP_046648038  114 ---------DIKNPYVSLPVVSSLKQPKl-----qQELAELDFFSQQAKLQMEARTALAQAKELARVQMQV------ERQ 173 
2_pfamImport   80 sinq-ikklQAANPYSSNPLSVSCTDGKns----qLENTDNDFFTKQARLQIEARMALAQARIWRTCKWRVdsisfiEKQ 154 
1_pfamImport   77 ---------------PMSKQSSSYSDRDtteeeseSLDD-MDFLTRQKKLQAEAKMALAMAKPMAKMQVEV------EKQ 134 
EFN70358     1014 ptslgskqlGGKQHAPMRPQVLSLPSLRlesanstPPVDEADFFARQARLQTEARMALAQAKEMAHMQMEV------ERQ 1087
EFA04405      187 pktspektlP-----PARPATLSLGQPLlqp--vtQPMTETDFFARQARLQTEARMALAQAKEMARMQMEI------ERQ 253 
XP_046648038  174 QRKHTRISDL------VRQSLEKLGIPFPWDCRRLSRQILTELNIAQLQVIVNDLHTQIEGLNEELVQLLLKRDDCHMEQ 247 
2_pfamImport  155 KQSLSPVTEI------IQTSMKKVGVPLPQQKRRVSRQTLTDLNVAQLQVIVNDLHSQIETFNANLVQLLMDRDDLHMGQ 228 
1_pfamImport  135 NRKKSPVADLlphmphISECLMK---------RSLKPTDLRDMTIGQLQVIVNDLHSQIESLNEELVQLLLIRDELHTEQ 205 
EFN70358     1088 RLKQSPITEM------VRCSLEKVGVQLGEDRRRLSRVLLTELNVAQLQVVANDLHARIAALNEALVEGLLRRDDLHMEQ 1161
EFA04405      254 RQKKSPITEM------VRNSLEKVGIPFPEEKRRLSRQILTEMNVAQLQVIVNDLHTQIETLNESLVKFLMDRDDLHMEQ 327 
XP_046648038  248 DSMLVDIEDLTRFLTAKQA 266 
2_pfamImport  229 DAMLVDIEDLTRYLSAKEQ 247 
1_pfamImport  206 DAMLVDIEDLTRHAESQQK 224 
EFN70358     1162 DSMLVDVEDLTRYLGAKQE 1180
EFA04405      328 DSMLVDIEDLTRYLGAKEQ 346 
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