6FAN


Conserved Protein Domain Family
CooT

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pfam10133: CooT (This model is not part of the current CDD release)
Predicted RNA-binding protein
Members of this family of bacterial proteins are thought to have RNA-binding properties, however, their exact function has not, as yet, been defined.
Statistics
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PSSM-Id: 490927
Aligned: 70 rows
Threshold Bit Score: 44.0211
Created: 21-Aug-2024
Updated: 4-Feb-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6FAN_D        2 CEASAFIVNGDK-E-ELFLERVDKLIPTEEGLLLENIFGQRKVIKAKIKRLELVDHRILLE 60  Carboxydothermus hydrogenoformans Z...
CDB88052      2 CLAMVY--KKEQkPeNLVLSNVQRIDCQDGQIILTDIMERQALVVGRLVSVDLVGNTALIv 60 
CCY42685      2 CLSNVY--ENSVeQkNLILSNVQRIDCKDGFVVLYDLFERETRVEGRLATIDLVGNTAVIv 60 
3_pfamImport  2 CLSTVY--KNKLtPeTVMMRNVMKIECRDGMVILTDLMERQMAVEGTLEMANLVDGVAVVK 60 
CDB30971      2 CLSTVY--KNKMsPeDIVMKNVMRVECKDGCVILTDLMERQVAIEGQLQEANLVDGFVIVR 60 
2_pfamImport  2 CLSDAYEIKDG--KqNLVCSRVCNVSADGENVTLTDLMGIRKIVPGKLKKVDLMSNVILIE 60 
WP_013413812  2 CESKVYLK-----NgELLMDDVILIKVDGDEIYMKDILNRENKIKGKIVEIDLDKHEIIIE 57  Methanothermus fervidus
Q6LYL3        2 CESTVYLD-----DgTVLMADVMKIVVNGDNLELYDILNNKKEIKAKFNVLDLECHKIIVT 57  Methanococcus maripaludis
WP_023992779  2 CESTVYNT-----QgTKLMDDVIHIKINGEKIEMLDILNQGMTVEGKIVELDLEKHSIFIK 57  Methanobacterium sp. MB1
Q58946        2 CSCNLYF------NgELVMEDVMIVEKKGDKVIAIDLFGDKKEFVGEIKKIDLNENKIFIE 56  Methanocaldococcus jannaschii DSM 2661
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