Conserved Protein Domain Family
PIN_2

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pfam10130: PIN_2 
PIN domain
Members of this family of bacterial domains are predicted to be RNases (from similarities to 5'-exonucleases).
Statistics
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PSSM-Id: 370825
View PSSM: pfam10130
Aligned: 12 rows
Threshold Bit Score: 110.573
Threshold Setting Gi: 506294648
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012965208     4 IVDTNKIVACLL----KDGKIRRILFLPFLELYTVQYAFE----EIEKHKDVLL--TKVSKSAFDLILF----KAKLKVK 69  Ferroglobus p...
jgi:Xcel_1573    8 VLDANIVISTVLg---VGARRLVSTHAGEAWLCAPQEAFD----DARRHLPTIAnrRGWTEATLAAALEal-dALEHLVH 79  Xylanimonas c...
tigr:ACP_2629    8 VLDANILLRAAFg---VRVRSLLEAYEDAVLFFTPDVCIS----DARQYIPALAskRGIDAAPGLAVLD----KLAGLIE 76  Acidobacteriu...
wustl:cce_0024   8 VLDANIIIRA------------------------------------------LMnkKNLSAEKALETLN----ILLNFIT 41  Crocosphaera ...
Q7NCJ6           4 VVDANVLVGRALg-----TKSRNIFIAPSLELFVAARAWDealhELPGRVEAIVrqGKLSSERAQSLANgaveLITSKAV 78  Gloeobacter v...
Q18IF5           4 VIGADAVISALI----ADSKTRELIVTLNPELLVPAFVHD----EVENYEDLIVdkSGMKPVRVAQFID----LLFQYID 71  Haloquadratum...
WP_015813611     4 VVDVNIIFSALItp-dGKLAKILTHPDLPARRISCYYAVV----ELFKHQSKIVkySKKSVDEVIDDLF----DVLTSMH 74  Dyadobacter f...
WP_015814423     4 VVDTNIVFSGILns-tSRIGNFLVNPPKNVR----EFLRA----EISKHNAKLLhlTRLPEEELEELER----LVTSKIT 70  Dyadobacter f...
WP_012966859     5 VVNSNIVFSSLIkgkkSRILRKIIFFSSIIELIAPEELLI----EIQKHFE------KFNSEELEECFH----ILFTRIG 70  Ferroglobus p...
Q7NLS5           4 VIDANILVGESLr-----KRGQELFSNPALEIFATQKVVEeyeyELAKRMEAMVrkGNQNLQSAQALRAaaiqCIEKNIQ 78  Gloeobacter v...
Q7NCG0          22 VVDANIIVGTLLr-----EAGRTLVAERRLDLFICERAVEealhELRKRGNAMVrqGRILPVQRDTMLElalsTLRRNIR 96  Gloeobacter v...
tigr:AFE_3173    7 VVDANILIRAVLg---LRVRLLIADACDRVSFYVAEANYD----EAKHYLAELApaRGISEVVWQDALD----TLMTAIQ 75  Acidithiobaci...
WP_012965208    70 SVGFSSKDeKYIQTAKKMANEFDPDDFPFIALALKLNAPIWTNDKKLIVHGLKSgtylavdtdaveklirgKSLEEVRQE 149 Ferroglobus p...
jgi:Xcel_1573   80 PIEPETYA-SQLPEAHLRIDRRDPKDAPILATGLLLSCPIWTEDQDFFGTGAAT-----------------WTTDRVELY 141 Xylanimonas c...
tigr:ACP_2629   77 IVNSSLYE-SYETQARERMQSRDMEDWPIVAASLLLQCPIWTEDQDFFGSGVSI-----------------WTTRTIEVY 138 Acidobacteriu...
wustl:cce_0024  42 IVDRSLYS-QFEKNARERMRTRDIDDWPILALSLVFNCPIWTEDTDFFCAGVAT-----------------WTTDRIHLL 103 Crocosphaera ...
Q7NCJ6          79 VIEEAQYV-LLENEARRRVPD-DPDDWPTVATALLLEADIWTEDRDFFGCGVAV-----------------WTTRTLLIQ 139 Gloeobacter v...
Q18IF5          72 VVTASEFY-PAIESADEAIGDTDPDDTLYLACAIACDAAIWSDDSDFS-----------------------LQKRNPNQA 127 Haloquadratum...
WP_015813611    75 LYNETLIEpEHWKEAERLTAGVDSFDINYVALALQTGAMLWTGDKKLV-----------------------DHLRKMGFE 131 Dyadobacter f...
WP_015814423    71 FFNEAVIPiQKLIDAERLLIDVDPNDTPFVALALAFDAILWTGDKVLI-----------------------EGLRRMGFE 127 Dyadobacter f...
WP_012966859    71 IVPREYYR-DKISEAYDIARQFDESDTPFIALSLKLNAPIWTGDKEMIKYGLKSdkylaldtqaveeltkgRKLEEVLED 149 Ferroglobus p...
Q7NLS5          79 PVPEPIYL-SNKMQALLRIPR-DPQDWPTVALALVLEAGIWTADGDFLGCGLPT-----------------WTTETLSAY 139 Gloeobacter v...
Q7NCG0          97 IAPELVYL-PVERQARQRIPR-DPDDWPTVALALVLESGIWTEDNDFLGCGLPT-----------------WTTQTLHTH 157 Gloeobacter v...
tigr:AFE_3173   76 LIGQETLS-PVEIAAKARIARRDERDWPAVAASLLLDCPIWTEDRDFFGAGVAT-----------------WTTETISIY 137 Acidithiobaci...
WP_012965208   150 LS 151 Ferroglobus placidus
jgi:Xcel_1573  142 LS 143 Xylanimonas cellulosilytica DSM 15894
tigr:ACP_2629  139 LR 140 Acidobacterium capsulatum ATCC 51196
wustl:cce_0024 104 FE 105 Crocosphaera subtropica ATCC 51142
Q7NCJ6         140 LG 141 Gloeobacter violaceus
Q18IF5         128 LC 129 Haloquadratum walsbyi DSM 16790
WP_015813611   132 RT 133 Dyadobacter fermentans
WP_015814423   128 QI 129 Dyadobacter fermentans
WP_012966859   150 LK 151 Ferroglobus placidus
Q7NLS5         140 LA 141 Gloeobacter violaceus
Q7NCG0         158 LT 159 Gloeobacter violaceus
tigr:AFE_3173  138 LD 139 Acidithiobacillus ferrooxidans ATCC 23270
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