Conserved Protein Domain Family
PocR

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pfam10114: PocR 
Sensory domain found in PocR
PocR, a ligand binding domain, has a novel variant of the PAS-like Fold. Evidence suggests that it binds small hydrocarbon derivatives such as 1,3-propanediol.
Statistics
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PSSM-Id: 490914
Aligned: 165 rows
Threshold Bit Score: 70.6931
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CDC73844              9 EVRKMLENFYTMSGIRVGLHSL-NN-----EIIGEYRhiAPdrrdYTFC-EMIrydhpaDFSMKCFDCDINAIERVR--E 79 
WP_015711417         18 EFKKLFRNFSVITGLDVGLFDG-GG-----FEILVNR--RE----NSIC-Na------aKNCSHCRESISYGGLMSQ--D 76  Leadbett...
WP_012636469          9 KLKKVINIYSYATGIGCRIISTeDMkevfqPPLSRPS----------FC-KMVhs--csRCDDDCKQSYIYGGLQAE--K 73  Halother...
WP_014254109         17 KAIKSLKAYSQSTGIESFIIDS-KG-----QCIHSFG--KN----TELCnLCQklrdntNKDSQCASVHLYGSYQAErfG 84  Acetivib...
6_pfamImport          2 KLKEALITYSFSTKIPLVLLDE-NG-----ETVYSVG--NE----EPFC-KFFkd--ftGEMNPCSQTHLYAAKQSE--K 64 
WP_013977159         13 DITAMLTAFNACTGLHTQLIDD-RG-----KIIVSVG--EN----AAFC-KEFir--hlPAQENCETEHANASRQAM--D 75  Clostrid...
4_pfamImport          7 VLKKILDSFTNATGLTANIVDT-EG-----RSIFSKE--DAqk-nCKFC-QLIwqyqreKGLHRCAGAYARAGKQAA--L 74 
goetting:Awo_c23720  26 TLQEILDAFTTTTGLMANIVDV-EG-----VSIFPRK--GIkk-cCKFC-RIIys--leGGKNRCQAAYKRAGKQAA--L 91 
WP_015044445         28 TLKEILDSFTTTTSLMADIVDV-EG-----ISIFPRS--GIkk-cCRFC-RIIyg--lkDGNNRCQSAYKRAGKQAA--M 93  unclassi...
WP_014356654         28 IITKILDSFTKVTGLTANIVDV-EG-----HSIFSKK--DAqk-nCEFC-HMIwrmekqKGISRCVGAYARAGKQAA--I 95  Acetobac...
CDC73844             80 TKKALIYRCHVGFMEALVPITAHGEVFCVLFIGQIIDEN---DSamtKARVRDMLDIMKCsdeVKAEYIAAYEK---IPV 153
WP_015711417         77 LGEPYICSCGCGLIMCFLPIMFKERLIGSIACGPALLWD---ADdvaISEFKEKTRRMEl----EVDVEKIFSS---IIS 146 Leadbett...
WP_012636469         74 LGEPYIYFCPYGLVNWAVPLFGEKKMEYFFTGGPVLLHP---VDdllIEDILNQNPLLGs---SYRELREHLNK---LIQ 144 Halother...
WP_014254109         85 GK--YIFFCPMGFVHWAAPITVDDTLFGAFIGGPVLMLD---PD---EFMLNDIIKENGl---NDEQVRELNEYigkVPV 153 Acetivib...
6_pfamImport         65 LGEAYTFFCPAGLIHYTVPVIKKGIFRGSVLAGPILMEF---SD---KLMISEIMQKFNIdlkylGMVESKIRS---IQV 135
WP_013977159         76 LGESYLFCCHAGLYHIVFPIISKDTMFGSVVTGPFLMEE---PD---ASLIIDVERRYHl---STETLLNLSEDsyqLKV 146 Clostrid...
4_pfamImport         75 FGEPYIFRCPAGLIEWAAPIIIDGEHLGSIICGQVLMWEpedFF---WIELKQFNKNLTd---DFGPLIEAAKE---LKV 145
goetting:Awo_c23720  92 FGEPYIFRCPSGLIEWAAPIVLNGEHVGTIICGQVLMWEpeeFF---WIELRKMNQAITd---DFEELFEAVEE---LAI 162
WP_015044445         94 FGEPYIFRCPSGLIEWAAPIILNGEHVGTIICGQVLMWKpeeFF---WIELREMNKSLTt---DFQDLFDAVRE---LPI 164 unclassi...
WP_014356654         96 FDEPYIFRCPAGLIEWAAPIIFDEEHLGTIICGQVLMWEpeeFF---WIELEEMNQFLTe---DFTALFEAAKK---LQV 166 Acetobac...
CDC73844            154 LSAEKLRAYVYFL-EISAQSIYDNS 177
WP_015711417        147 LDCINMTSAAQIL-YIIVNNLSSEH 170 Leadbettera azotonutricia
WP_012636469        145 VDTVRARYLSELLmELSKNVMLERG 169 Halothermothrix orenii
WP_014254109        154 IEPERVNNLAELL-AIVAGNISKGN 177 Acetivibrio clariflavus
6_pfamImport        136 IDPTRVRYLGNLL-FIVAFSLLDDE 159
WP_013977159        147 ISPDLANQYSKLL-YYLMNNLNQGS 170 Clostridium sp. SY8519
4_pfamImport        146 VSGKKVKAAADLL-FVTANYIMKAG 169
goetting:Awo_c23720 163 VTGNQVQASAYLL-YVVANYIMKAG 186
WP_015044445        165 ISGHQVQAAAYLL-YVVANYIMKAG 188 unclassified Dehalobacter
WP_014356654        167 VSGEKVQCAASLL-HVIANYIIKTG 190 Acetobacterium woodii
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