Conserved Protein Domain Family
Glycoamylase
?
pfam10091: Glycoamylase (This model is not part of the current CDD release)
Putative glucoamylase
The structure of UniProt:Q5LIB7 has an alpha/alpha toroid fold and is similar structurally to a number of glucoamylases. Most of these structural homologs are glucoamylases, involved in breaking down complex sugars (e.g. starch). The biologically relevant state is likely to be monomeric. The putative active site is located at the centre of the toroid with a well defined large cavity.
Links
?
Statistics
?
PSSM-Id: 490894
Aligned: 15 rows
Threshold Bit Score: 226.492
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
?
Aligned Rows:
Download Cn3D
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
Q1GUD9        229 THDWVGYNEGMLVYILALGSPTHPVGTDAWEEgWaA---DLEKDWGSYYGQEHLQF-----EPLFGHQYSHVWVDFRGIR 300 Sphingopyxis a...
Q5FT68        248 PSDWKGYNEGLIIYLQALGSPTHPLPAETWKA-WtA---TYENQWGDFQGHKLLNF-----APMFGHQYSESWIDFRGVQ 318 Gluconobacter ...
Q8P8N3        243 dHDWMGYNEAMMLYILALGSPTHGVEPDAWTV-W-Tr--tYNNDWGVYQGQEYLSF-----GPMFGHQYSHVWIDFRDIQ 313 Xanthomonas ca...
WP_011930555  179 HYGWEGYNEAALLYVLGLGSPTFPLTPAGYVT-W-----QLTYQWENLLDRDVLYS-----GPLFTHLFSHAWIDFRGIR 247 Acidiphilium
jgi:Pnap_4503 190 PYRWSGYDEATLLYVLGLGSPTHPLSAESYAA-W-----TSTYEWKTIYGHELLYG-----GPLFIHQYSHIWLDLRGIQ 258
Q21ZB9        180 AYRWEGYDEALVLYILGLGSPTHPLPQSSYAA-W-----ASTYEWKNSYGYDYLYA-----GPLFTHQISHLWIDFRGIQ 248 Rhodoferax fer...
Q7UQD9        213 PYQWDRFSELTILVLLAIGAPSSAIPPSCWNA-W------RRENVLHHQGESFVSY-----PPLFVHQYPQAFFDFRGVV 280 Pirellula sp.
WP_011993439  166 GH-WDKYAEQLMMYFLGVASPTYPVEPSVYWS--------FQRDIGNYKDYELIYTy---tGSLFTYQFSHAWIDFRKIT 233 Fervidobacteri...
1_pfamImport    1 ---WDMAAEQKMIYLQAALHLDPTTARALYRG--------FRRDKGDYRGQSIIINp---gGTLFAYQYTEAWLDVRTYR 66 
Q8A1U2        214 DFPIHGYNECMIMYILAAASPTHGVPAAVYHDgW-AqngAIVSPHKVEGIELHLRYqgteaGPLFWAQYSFLGLDPVGLK 292 Bacteroides th...

Q1GUD9        301 DAFmrgkGIDYFENSRRATLAQRAY----GADNPNKWVGYSADIWGWTASDGPGYSKGRysvngtprdfnGYMARGVSAI 376 Sphingopyxis a...
Q5FT68        319 DAWdrahNVDYFQNGREAAYAQRAY----AQANPGDWKDYGPNIWGLTACDGPGDAQQVydgkk--rhylAYSARGAGRD 392 Gluconobacter ...
Q8P8N3        314 DQYmrerGIDYFLNSRRATLAQRDY----AIDNPMKWKDYGENVWGLTAGDGPQNTSQEyrgeq--rqfrHYSSRGAGLR 387 Xanthomonas ca...
WP_011930555  248 DEFmrekASDYFENTKSAIAVHREY----AERNPYGFEAYGRDFWGVTAGDGPTAPEMLengkd--crffGYMSRGVPYG 321 Acidiphilium
jgi:Pnap_4503 259 DVFardkGIDYCENSRRATYVQREY----AIRNPLDFAGYGENFWGLTASDGPGSTTRRikgie--rsffDYVARGAPYG 332
Q21ZB9        249 DAFmrekGIDYFENTRRATYVQQQY----AIDNPLKFAGYGKHCWGITASDGPGPETVKvkgie--rhflDYVGRGVPYG 322 Rhodoferax fer...
Q7UQD9        281 SSD----GRNYWRNSQLAHLAQIEFqqslADQSPKRFGHYGEDLWGLTSSDSSN----------------GYRDWGGPYE 340 Pirellula sp.
WP_011993439  234 DKS----GVNWFENSVKASLANWEY----CKEMHDKYKTLHEYSWGLTACDSPS----------------GYRGDFGAPP 289 Fervidobacteri...
1_pfamImport   67 DPD----GVDWFTNTRLASMANRDY----CVSLHERFRTYHANSWGIGCGDTPR----------------GYVVAGAPPA 122
Q8A1U2        293 DEY----CPSYFHEMRNLTLVNRAY----CIRNPKHYKGFGPDCWGLTASYSVD----------------GYAAHSPNEQ 348 Bacteroides th...

Q1GUD9        377 RV------VDDGTIVPTAAGGSIPFAPEVTIPALMTMRtTFGPRLYTRYGFKDAINP-SFtftdfgsksgevdpVHGWVA 449 Sphingopyxis a...
Q5FT68        393 YI------LDDGTIAPTAVGGSIAFAPEIALPALKEMRaRYGDRIYNKYGFLDAFNP-SFad-----------qKSYWVD 454 Gluconobacter ...
Q8P8N3        388 En------FDDGTIAPTAAISSIVFAPEVVIPATEEMHkRYGDFLYSSYGFLDSFNP-SFnydiplk-tgrmvpDRGWVA 459 Xanthomonas ca...
WP_011930555  322 P--------DDGTIAPWAMLATLPFGADAALAGTRGLL-ELHPKVCHQDRFSSGFNP-TLsd-----------gDGGWLS 380 Acidiphilium
jgi:Pnap_4503 333 P--------DDGTVAPWAVAASLPFAPEIVLPTLQHFQ-DVYPQVTGEYCFRCSFNL-SFsdea------esdgHVGWTS 396
Q21ZB9        323 P--------DDGTIAPWAVVASLPFAPEIVLPAIDFLVhEVELKTGNPCGFKATFNP-TYphk--------rsnPHGWVS 385 Rhodoferax fer...
Q7UQD9        341 DGqaqpdrGIDGTVVPSAAGGGLAIAPEQTMRTLQYQKnTFGESVYGRYGFVNAFNP-RR----------------GWIG 403 Pirellula sp.
WP_011993439  290 SAnnntqhYVDGTVPPCGALGSIVFVPEIVEETVRYYY-EKVPQLWGKYGFKDAYNLdK-----------------NWTS 351 Fervidobacteri...
1_pfamImport  123 LIp----pEPDGTVSISNATACLPFIPDDVLAMLDYLY-REHPQSYGRYGFYDAYNL-DT--------------VPAWYS 182
Q8A1U2        349 D--------DKGVISPTAALSSIVYTPEYSMQVMRHLY-NMGDTVFGPFGFYDAFSE-TD----------------NWYP 402 Bacteroides th...

Q1GUD9        450 RDYIGIDQGPILAMMENHRSGLVWKVMRRNR 480 Sphingopyxis alaskensis
Q5FT68        455 GQQLGIDQGPILLMLENWRSGLVWNTMKKNA 485 Gluconobacter oxydans
Q8P8N3        460 SDYIAIDQGPILAMIANYQNEFVWNVMKKNa 490 Xanthomonas campestris pv. campestris
WP_011930555  381 TGWYGLDQGLLVMMIENHRTDMIWEIMRHCS 411 Acidiphilium
jgi:Pnap_4503 397 PYHFGINLGPVVLMCENYRSGLLWRLMRACP 427
Q21ZB9        386 PWHYGLNQGPIVLMIENYRTGLLWRLMRDSS 416 Rhodoferax ferrireducens T118
Q7UQD9        404 SDVIGIDTGITLLSASNLLEEGVWQPFMQHP 434 Pirellula sp.
WP_011993439  352 EVYIGIDKGIELLMIENYLSGLIWDIVMKSE 382 Fervidobacterium nodosum
1_pfamImport  183 HTIYGINKGCALLMLENACTGLIWDIYTNSP 213
Q8A1U2        403 QRYLAIDQGPIAVMIENYRTGLLWKLFMSHP 433 Bacteroides thetaiotaomicron
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap