Conserved Protein Domain Family
DUF2310

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pfam10071: DUF2310 
Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
Members of this family of proteobacterial zinc ribbon proteins are thought to bind to nucleic acids, however their exact function has not as yet been defined.
Statistics
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PSSM-Id: 490878
Aligned: 18 rows
Threshold Bit Score: 326.955
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P44154         1 MYLIETYFRLTALENNIESQSrLLNAVIDQWRYNGQIIGREIPLYLAEEdg-aqGFAMRVICPEQDSLFPQNNNAEVNRA 79  Haemophilus inf...
Q87RS4         1 MYVVELQFECFDNTTVSAVDK-AINGLMDALRYNGQVLGREFPIVMGDG-----EFFVRVVCPEQDSLHPRYHSDFVKVC 74  Vibrio parahaem...
WP_013344450   1 MYLVEIRFECFADTTLSAVER-AINGLMEAWRHNGQLLGREFPLVQNEA-----EFRLRAMCPESDSLHSRFHSDWAREA 74  Ferrimonas bale...
Q12P26         1 MFVTELRFECFADTSIEAAEK-AINNFLEALRANGQVLGREFAVAFNDG-----EFRVRLLIPERSSLANRYNSPWVKVA 74  Shewanella deni...
WP_011759238   1 MFVCEVRFECFADTTISAAQH-AINHLLEAWRANGQILGREFAVSFHDG-----EFKARLMLPAQDSLANRHNSPWAKAA 74  Shewanella amaz...
Q7VLG0         1 MYQVIANFSFQNFEHDPVI---LINQIINQWRYNGQIIGREFSVTYHTQps--aHFQVRLATPEQISLMPEWNNDQVTEA 75  [Haemophilus] d...
Q9CNF5         1 MYLIEAFFRYTPTDDVTQDPVyLLNQLIDQWRYNGQIIGREIPLYIANLee-qqGLAIRLICPEQQSLLPEYNNQTVENA 79  Pasteurella mul...
WP_012072943   1 MYLIEVFFRNQPADNLLAQMP-LINKVIDQWRYNGQILGREIPVFPAQQdg-qpGLATRVICPEQSSLLPENNNVEVEKA 78  Actinobacillus ...
WP_014678807   1 MYIQEISLEINSGVDIVLIED-QFDILMSHYRGSGQTQGK-----IESQytsgnKIISLPYTHEDESLHKNYNNRYVNRQ 74  Solitalea canad...
WP_015757524   1 MYTAELIFKLEQGKDTKNAEE-AIDVLLGALRMNGQILGREFPVGRKDE-----NYRAYLLLPTTDSLDKKCANNYVRDA 74  Desulfofarcimen...
P44154        80 LQEAEKCGVIFDGFQLVGDDFNSDQTA-ENASPAWQVLYTTHLQSCSPIHSGENFAPIPLYKQLKNQPHLTQDLIKWQEN 158 Haemophilus inf...
Q87RS4        75 MNRLSDASLLAPKMRMLGRDLNSEQAA-EDEAPSWQVLYTTYVHTCSPLRSGETLLPIPLYRNDPTLNGDHKAVIKWQTE 153 Vibrio parahaem...
WP_013344450  75 LAALTDAKLLQPRVKMLGRDINSEASA-DAVPTDWQVLYTTYVHSCSPLRDGNTMMPVPLYRLPATFNGDHKAVVKWQTE 153 Ferrimonas bale...
Q12P26        75 LNGLTEAKILAPREKFIGQDINSEASN--THQPSWQLLYTSYVHMCSPLRNGDNLLPIPLYQIPATFNGDHKRMIKWQSE 152 Shewanella deni...
WP_011759238  75 LKGLTDAKILPPREKLLGQDINANESA--THTPEWQLLYTSYVHMCSPVRSGDNLLPIPLYKLPATFNGDHKQLIRWQTE 152 Shewanella amaz...
Q7VLG0        76 LSQAAEKGVEFESFEIIGRDYQAEQTS-ENSNARFYILYTTHLDSCSPLYNGDDFCPVPLYRLLQKDQSLAQALIKWQEN 154 [Haemophilus] d...
Q9CNF5        80 LTHATKCGLFFDSFQVIADDLNADQTS-QHEKVSWQVLYTTHLQSCSPLHSGEDMCPIPLYRVLKDIPHLSMDVIKWQEN 158 Pasteurella mul...
WP_012072943  79 LAQAEKCGLFLDSFQIIGEDLNSDITF-AQNKPQWQVLYTTYLQVCSPLHSGDRLAPIPLYKQLKTIPHLSIDIIKWQEN 157 Actinobacillus ...
WP_014678807  75 TLKIEELCASKLQFSTVGKSYHDYESAcKCAKPAFYILITNYLSISSPVKCGNCYMPVPLYKLPEYYDYGYMPILSWESN 154 Solitalea canad...
WP_015757524  75 IHKLDEVGLNYSSV-LTGKEPYAASAC-RCGASKSFILYTHYISLESPLRCGCCFGIIPLYRLHPTSNGEYVDILTWQSD 152 Desulfofarcimen...
P44154       159 WQACDQLQMNGAV-LEQQSLAEISDHQSTLSKHGRYLAQEIEKETGIPTYYYLYRVGGQSLKSEKSRCCPSCGA-NWALK 236 Haemophilus inf...
Q87RS4       154 WQACDEIQMAGGCrAEHAALHEICDVDSVLFRRGWDLRGRIEYITKIPTYYYQYRVGGQSLESEKARKCPKCGG-EWLLD 232 Vibrio parahaem...
WP_013344450 154 WQACDELQMAGSGqVEFAALAEIADPQSTLFRRGWDLRGRIEYLTGVPTYYYLYRVGGESLEAERARPCPRCGNpEWALD 233 Ferrimonas bale...
Q12P26       153 WQACDELQMAAATkAEFAALDEISNTDSDLFRRGWDLRGRIEYLTKIPTYYYLYRVGGESLNAELSRPCPKCGSlEWKLA 232 Shewanella deni...
WP_011759238 153 WQACDELQMASATkAEFAALDELCNVGSDLFRRGWDLRGRIEYLTKIPTYYYLYRVGGSSLQDELARPCPRCGStGWRLD 232 Shewanella amaz...
Q7VLG0       155 WQACDQLQMNGTI-LEQPALNEISEIDSNLAQLGIKLCREVERVTQVPTYYYLYRL-GTDEAVEYQRKCSSCGA-EWRLT 231 [Haemophilus] d...
Q9CNF5       159 WQACDQLQMNGSI-LEQYALAEISEPKSTLSKHGRYLVNEIERHTGIPTYYYLYRIGGNSLAQEQQRCCPQCQK-KWQLA 236 Pasteurella mul...
WP_012072943 158 WQACDQLQMNGAV-LEKQTLAEISDTAGNLFKHGYYLAQEIERHTGIPTFYYLYRVGGESAKSESARLCPLCGG-EWRLP 235 Actinobacillus ...
WP_014678807 155 YISCDTLQMNSEV-GERWGLNQMQNFDSSLSKQGREICKKIEELTNTPTYYYLHNY-RKIKGDQLKTPCPSCNK-KWSLK 231 Solitalea canad...
WP_015757524 153 YQACDTLQMNSAT-GERFALHQISRFDSSLSQRGIEICNNITSLTGIPTYYYLYRAIRRGKKSEQKRKCPSCTD-DWFLK 230 Desulfofarcimen...
P44154       237 DAIFDTFHFKCDTCRLVSNLSWNF 260 Haemophilus influenzae Rd KW20
Q87RS4       233 EPLHDIFYFKCDSCRIVSNISWDH 256 Vibrio parahaemolyticus
WP_013344450 234 EPLHDLFYFKCDACRIVSNLSWDL 257 Ferrimonas balearica
Q12P26       233 EPLLDMFQFRCEPCRIVSNLSWDH 256 Shewanella denitrificans OS217
WP_011759238 233 EPLLDMFHFRCEPCRIVSNLSWDY 256 Shewanella amazonensis
Q7VLG0       232 EPLHQIFHFKCDKCRLISNLSWQL 255 [Haemophilus] ducreyi
Q9CNF5       237 QPLFDLFYFKCDDCRLVSNLSWHW 260 Pasteurella multocida
WP_012072943 236 TPLFDLFTFKCDDCRLVSNFSWNW 259 Actinobacillus succinogenes
WP_014678807 232 KQLHSVFDFKCDYCRLVSSVSpns 255 Solitalea canadensis
WP_015757524 231 EPLHQLFDFRCDRCRLLSNFa--- 251 Desulfofarcimen acetoxidans
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