Conserved Protein Domain Family
Major_capside

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pfam09950: Major_capside 
Major capsid protein
This entry represents a group of proteins from tailed bacteriophages, bacterial prophages and some lower eukaryotes, including Major capsid protein from Pseudomonas phage KPP22. This family was previously known as DUF2184.
Statistics
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PSSM-Id: 490772
Aligned: 21 rows
Threshold Bit Score: 216.414
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012205918  60 GRaNWQSGYAKDIPLADVNQDMQTKTFQLAAIGYQWNLEEVNTTMAFpGASLSDRRARAARLAYMKFMFDLTLKGSP-EK 138 Delftia acidovo...
Q7N327        62 KD-GIIGNKTNSLKTIDSDIEWHKAPVGQWGKSATWTQQELEKIARL-NINLQTKKQDDLYANATATIQYAGYVGHEgVK 139 Photorhabdus la...
1_pfamImport   1 D--GLITVGTSTLDQVEVGFTPTRSYIVPWAKSVTWTKPELEQGKLL-GLALNTAKIMALNKNAQQTLQKVAFLGHAkDS 77 
CDA50593      26 NDlSIVGTASNTIPVMQVSTEKNLYKVFTWMHMMRINFVDMAKAKQI-GRSLEDMLNKGIRLNYNKSLDMNVYKGFE-KL 103
WP_006192081  82 GQaDGVGGIQNAVRRIQADLSKDLYKVLPYEVSMSIKIQDQLRGAVT-GRSIEDIYNDGIRLDYDKYMDINTYLGQE-AY 159 Selenomonas spu...
WP_015875594 109 nglNWISNEGNAIAGPSVDIGKTPQPMRLWGAEVKYTVPELVKSQKL-GMPIDAQKVDAMNLKRNMDIDQIVYFGDP-QI 186 Burkholderia gl...
WP_014402917  87 tgkAWVGKDASAITGLGLDIGKTMHPLSLWAMQIGWTIPELASAQQL-GRPVDQQKFAGMNLKHQMDIDEQVYIGDT-VL 164 Frateuria aurantia
Q32EP9        70 ngkNWVGKDSTAIAGVNVDIGKSGNPLNLWGMELGWTVIELQAAQQV-GRPIDTQKYDGMQLKWQMDNDEQVYVGDS-AL 147 Shigella dysent...
CDC08697      91 GMaKIIHNYATDLPRADVKGEPETAHIKSIGGSYGYSVQEMRASRKS-GKGLDHRKAEAARYAVDVALNKIAWAGDP-EN 168
Q6FAE7        80 GIgKDYSGTGGDLPLAEVEYDTVSLPIKVGVISYQYSIMEVAAAQQM-GIQLEGDKVQAARLAAEKHLSQIAWYGNS-LT 157 Acinetobacter b...
WP_012205918 139 GMGG-LINY-NGVVVANAPADGtggstlwvnaagvgqKTPAQIV-RDINIALQ---GISLA--TFE--TELADTILLPVE 208 Delftia acidovo...
Q7N327       140 GQEG-LLTG-SKVQLIAEVTGK---------------SIKDMSAeEFINMVLNaynVAWAK--SGY--RIQPTHVAIDAS 198 Photorhabdus la...
1_pfamImport  78 RLTG-LLNN-KSVEVYAIKGAAq--------------NTKVQAM--DFDKAVAffkEIFLKgmEKTkrIEAPNTFAIDSL 139
CDA50593     104 GTTG-LVND-PNVVVATADNGAsgka-------twkdKTPDEIL-DDINQAIT---AAWVA--SEYdlDGMPNHILIPPQ 168
WP_006192081 160 GTTG-LLND-KQITATAVTAGAsgqt-------dwahKTPTEIL-NDIDEAII---AGWTG--AQYdnSAIPNHILIDPA 224 Selenomonas spu...
WP_015875594 187 GFTG-LVNSnSAVASVTNVANGasgtp------qwttKTPDEIL-RDVNEILT---SAWQA--SGW--KVKPNRLMLPPA 251 Burkholderia gl...
WP_014402917 165 GLEG-LVNS-SAVTTTNVVNGAsgsp-------lwssKTPKEIL-ADFNAILN---LAWEA--SAY--AVCPTKVLIAPA 227 Frateuria aurantia
Q32EP9       148 NLKG-LVTL-DGVPVNNaakt-------------watSTPDEIR-ASINQVLS---DAWAA--SGY--SVVPRDLLILPE 204 Shigella dysent...
CDC08697     169 RLMGvLTTS-NNIPVTTATAGKggsa-------kwkdKTADEIL-ADINGYMA---TVSRN--TKN--VERPDTLALPTD 232
Q6FAE7       158 GVKG-FLNQ-TGVTVVTaqhd-------------watATIEQIL-SDFNASLSdseDLFDGd-----iSVQPDTYLMASN 216 Acinetobacter b...
WP_012205918 209 AFNyIAATPYSATT---METIL------SFVMRTNLYTMQTGRPLTIRTVRElGTGAAN----GTT-------GRMVAYK 268 Delftia acidovo...
Q7N327       199 DFM-LAMQKFDTNSvivGVDLLpvsamdRIMAALRKASNNDSFSITFVKVPSnFAKNIV----KGK-------TRLAIYT 266 Photorhabdus la...
1_pfamImport 140 DLAhLALVQRANTD----TTAL------EFLTKHLSAAA--GRQVAIKALPSnYGTRVT----DGK-------TRAMVYV 196
CDA50593     169 QYTlLVTRKVSEAG---NCSLL------EYLMNNNIA-KNQGRSISIYPSRW-CIKAGA----GQT-------DRMVAYV 226
WP_006192081 225 NFAyINRTMVSVNGyptPVSIM------QYLVDHNIA-KAKGVDLVIAECRF-CIGAGI----GKK-------NRMVAYV 285 Selenomonas spu...
WP_015875594 252 QLGwVASQVISSAG---NKSIL------TYLLENNIC-TQQGVKLEILPLKW-LIGAGT----GGTpgtlgtvDRMVAYN 316 Burkholderia gl...
WP_014402917 228 KYSiL-TQPVSEAG---NISIL------EYVRTNCISHNVNGRPLDIQPVKW-LAGRGT----SGT-------DRMVAYT 285 Frateuria aurantia
Q32EP9       205 QFAlLSSIIVSSAG---NQSLL------TYLQTNTISYHQNGVPLNIRAVKW-LKGRGV----GNK-------DRMVAYT 263 Shigella dysent...
CDC08697     233 VFIdIATRRIDHTN----TTVK------DFVLEHAPYLK------EIVAAAE-LNSDSVetnpYAKssd--gqNVAFFFT 293
Q6FAE7       217 QYSsLSNRVVPDSG---GKTFL------KFIEENNIF-ATQSKPLTIRGLGR-SNGKGT----AGA-------DRSIIYR 274 Acinetobacter b...
WP_012205918 269 NDGEYVKLHLPMPHRF-LPVYqDGPLNYAVPGIFRTGGVELLTTVAMRYIDQ 319 Delftia acidovorans
Q7N327       267 YSEDYIEMKVHMPELL-AVRQ-RDLLTFECGYRSAFGGAMWKQPKSAVYVDY 316 Photorhabdus laumondii subsp. laumondii
1_pfamImport 197 NSKEHVIFDVPMSPTV-LDAQpKGLLAFESGLRMAFGGVTFMEPDSALYVDY 247
CDA50593     227 NDEDKVNFDITVPITRaMSSPnLSAAAYDTLYAAQIGQVKFNYYQPVRYIDG 278
WP_006192081 286 NQRRFVGMDVPVPMSRvMTQPnVNTASYDSLYMANVGQVKIHYFEPFIYRDG 337 Selenomonas sputigena
WP_015875594 317 NDKKYVQYPM-TDLQR-TPLE-YRSLFQITTYWSRLGQIEWRYGTTGAYRDG 365 Burkholderia glumae
WP_014402917 286 QEMDRVRFPY-VPLQR-TPLE-YRDLRQLVTYFGRLGAVEFVYPETLAYADG 334 Frateuria aurantia
Q32EP9       264 NDKKYVRYPL-VPLQS-VPVQ-YRGLYQIVTYYGKLGAVEPVYKETISYVDG 312 Shigella dysenteriae Sd197
CDC08697     294 KDPDKLAVEDPMPYYQ-YPVQ-ERNLEMIVPCEARTAGVIIYYPLSALIAvg 343
Q6FAE7       275 RDPSCIQMKCD-DVSF-LAAQ-PDGLDVKVPGHYKYQGVWLKRVDSLRYLDH 323 Acinetobacter baylyi
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