6TEH


Conserved Protein Domain Family
Phage_phiJL001_Gp84_N
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pfam09931: Phage_phiJL001_Gp84_N (This model is not part of the current CDD release)
Bacteriophage phiJL001, Gp84, N-terminal
This domain is found in a family of proteins found almost exclusively in phage or in prophage regions of bacterial genomes, including the phage-like Rhodobacter capsulatus (Rhodopseudomonas capsulata) gene transfer agent, which packages DNA.
Links
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Statistics
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PSSM-Id: 519122
Aligned: 46 rows
Threshold Bit Score: 108.461
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
6TEH_C         4 PESLKAHL------QGGVTTLARAWALARADGRV--LGFTDHDVVLRFD-GI---SFEPGSGM--------TAKAVLQGT 63  Rhodobacter cap...
WP_012406313   5 SAAMLAHL------ASDVQTLATLWTITRTDGQV--FGFTDLDQPITYG-GV---TYQSAGGY--------THSQIDMTS 64  Paraburkholderi...
WP_010263429   5 AQKLPAHT------SHAVITTALCCRISAENAD---IRLTEHDENLEID-NA---VYSSGYGI--------NFGPIYRGK 63  Anaplasma
Q2GG02         5 DPELKQHL------SSEVLTIAYCLQIILQNKKI--IGLTNFDQNLIID-NI---TYETTPGL---------NIDILKYD 63  Ehrlichia chaff...
WP_371223138   5 SDEFANKI------NNS-NNIDFCYKITLFSGEK--LYLTSSPTSILLG-KN---LYLPNSGL--------VINSINLND 63  Orientia tsutsu...
Q2WA46         5 TPELKALL------ATRRFFRADLYVIFLPDGTT--LRYSGADCDIFAE-GG---VWPCGGAVgpyfgrtgNRPKIHQKL 72  Magnetospirillu...
Q6FAF8         5 SDKMAALL------ESNQFVIAELYTITTIQGNE--YRYTNYDYSLIVD-GK---AYLFNGPIi-------ERDSLSYKI 65  Acinetobacter b...
WP_244406149  18 SQELIAHLnglrtrRDAQGIIADCYTFTLRTGLI--LNYTNADVPITLN-SV---VFAANSILv-------EGLRFKCEV 84  Methylocella si...
WP_023172216   5 APALLSHL------QQEVTTLAYLLRLTRVDGAV--YGFTTLDYDFAVG-ST---TYRATEGL--------SPTAVSQNS 64  Gloeobacter kil...
WP_012205905   5 PIALQEHL------DGDATTVCLLVRIEPVAPGFdpVGVTTLDRDVLFDaGTgalLYRAAVGV--------DSSARVSSS 70  Delftia acidovo...

6TEH_C        64 GLSVDNTESYGALs--SEAITE-----ADLLAGRYDGAAVTVWLVNW----AD-----PAM-RAVIFRGHLGEVSRGAGA 126 Rhodobacter cap...
WP_012406313  65 DMSTSNLEVNAIFd--SSAITP-----ASLEAGQWDYARVQVSLVNY----AD-----LTMgAVLLESGVLGQVVLLNGT 128 Paraburkholderi...
WP_010263429  64 DRSIASIEITKY----GSIMRE-----QALASGQRSRIEVEIFSIDY----DD-----VSReKITLFVGMVSTITVENHR 125 Anaplasma
Q2GG02        64 AISGNSTKIETTIn--SNIIKE-----EEILSGLYDFATVKIFFVNY----TN-----LTQgSAILFHGNIDKIILNNDK 127 Ehrlichia chaff...
WP_371223138  64 S-GEAIAEIEGIFe--KQGITY-----NHILHNLKIEILITVDQTSY----ND------------FFTFYCIEVNHDTVK 119 Orientia tsutsu...
Q2WA46        73 GTDVDNMVVDVLP---GRATILgvpflTAVQQGLFDGAWLEYRKAYMptvaDArywplRTTgTVRRFLGRIAEADAGGSV 149 Magnetospirillu...
Q6FAF8        66 GIELDSLSVTVSIn--DDVMLDslpflQAVHNGQLDGARFKLERVFM----DPehpfdTSAgTIKLFDGLIVEPDFTRTA 139 Acinetobacter b...
WP_244406149  85 GFNVDQQQITLSAr--QSDTIGgipfpQAIRNGALDGAEIQRDRSFL----TSws--eEPVgTVTLFKGRVGAIDSVGRT 156 Methylocella si...
WP_023172216  65 GLEVNNLQIELFLt--DIGITD-----NDVQVGKFDAARWDLFIFNW----QDlptaiPSDkALQIGGGYVGEGQQTERL 133 Gloeobacter kil...
WP_012205905  71 DMAVDNAEGTSLVpefDVPVSE-----RDLVAGAYDYARWTSYLVNF----ED-----TTQ-FVELARGELGQVRVSQGM 135 Delftia acidovo...

6TEH_C       127 -FTAELRGLTAALGQEQGR-IYHPRCAAVLGDGRCRFD 162 Rhodobacter capsulatus
WP_012406313 129 -YKAELRGLAQVMQQEQGQ-TYSPTCRAVFGDARCQID 164 Paraburkholderia phymatum
WP_010263429 126 -LKISLEGIQSALSDKIGI-LFSPHCRAQFCDSKCKLD 161 Anaplasma
Q2GG02       128 -FTAEVKSTFNILSRNIGD-LFSSSCRAQFCDNKCKLN 163 Ehrlichia chaffeensis str. Arkansas
WP_371223138 120 -FCLSLSSIGIKLYQTILK-TYSKSCRANLGDKYCKIN 155 Orientia tsutsugamushi
Q2WA46       150 -ATFTVNSPMELLQKPLPRnLYQPGCQNVLGDLACGKD 186 Magnetospirillum magneticum AMB-1
Q6FAF8       140 -LQFSVKPDLDVLSVQMPRdLYQPSCKNTLFDIRCSLN 176 Acinetobacter baylyi
WP_244406149 157 tAQIMVNSDLILLDIDMPRnLYAPNCQHVLYDSGCSLv 194 Methylocella silvestris
WP_023172216 134 sVTYDLRGLTQQLSNNIGE-VTSPTCRYNLGDVRCTVN 170 Gloeobacter kilaueensis
WP_012205905 136 sFTFEMLGLTKRLKQTVVE-KDSLRCRAIFGSqplgtp 172 Delftia acidovorans
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