7THW


Conserved Protein Domain Family
DotU

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pfam09850: DotU (This model is not part of the current CDD release)
Type VI secretion system protein DotU
DotU is a family of Gram-negative bacterial proteins that form part of the membrane-joining complex of the type VI secretion system. DotU binds tightly to IcmF and together they are tethered to the inner membrane at one end and the peptidoglycan layer at the other; they interact with Lip1 which then tethers the peptidoglycan layer to the outer membrane.
Statistics
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PSSM-Id: 490688
Aligned: 110 rows
Threshold Bit Score: 83.5123
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7THW_D        14 IAAAXPLLLLVENIRSWPT---RNAAEVRPPIVRELQYFQQHLQKK-NYPQEDINHLSYLLCTYIDGIFngLQTP----- 84  Yersinia pestis...
WP_013659972  57 LKAGSELLSLTISVKRMQCp--TDMFAFRSGIKNALTDLKYKVAKL-DYPPSVADKACFLFAVMLDEQI--LHSSwge-s 130 Marinomonas med...
WP_025280152   6 LHCAGPLLLTLTALN-EPDqnpSDASTWRQRVLEDMEQFSRRAQAR-DLPGPGVQDARYALTVLVDERA--MALTdal-a 80  Ectothiorhodosp...
Q88IA7        21 KDLVQDFISMALIVR-RGRq-vTSVQAFEGSVERFFANLERDARAA-NYSVEQVKDTQYALCAFLDESV--LRSDdnalr 95  Pseudomonas put...
WP_025414345  23 ALALQEALTAVARLR-ADRqpvTDAAGFRAHMLHLLGRAEAEARSA-GYEAADVRMAVFAVVALLDESA--LNARqpa-l 97  Gemmatirosa kal...
WP_015895675  13 ASALQEALTAVVRLR-ADRqpvPDAAAFRAQIVQMLARAEQDALQM-GYSTQDARLAIFAIVAFLDESV--LNTRvpa-l 87  Gemmatimonas au...
WP_013572718  20 ALSFQDVITVVLRMR-YGAqriPDAAAFRVSIRKMIAASVQEVRSL-GYSDATSHMALYAIIGFLDESV--LNSQdpv-f 94  Granulicella tu...
WP_013567642  10 ASAFQEVFTAIVRVR-FRLqrvENASAFRDEIRQSLQHAMQQARSL-GYTNEGIQVAVFATVAFLDESV--LNVQdpv-f 84  Terriglobus saa...
WP_014266062  23 ASLFSEVLTAILRIR-YGKqtiGDTHSFREHMRRLLQTAMQEARSL-GYSSEHIQMAVLATVGFLDESV--LNLAsaa-p 97  Granulicella ma...
Q7VJJ2        28 LHLTLPLLLFATRLSKTGIlddSYITNTEETFANEILSIGSNLNALrCYEDKDLIKLRYCLCVFIDEML--LHNEsfi-n 104 Helicobacter he...
7THW_D        85 -DSYNQSLLVEFHRDAWGGEDCFEHLRVY--XNSPKQYREVLEFYDLIXCLGFDGkyqxiehGAVLLXDLRSRLHTQLY- 160 Yersinia pestis...
WP_013659972 131 sGWENQTIVSELFGIKNGGEQFYVVAERA--LLQPVLLVDLLELIYIMLKMGFRGryr--anGKDQLDALMKRIEESVF- 205 Marinomonas med...
WP_025280152  81 qSWAEEPLQVTLFGEYRGGEGFFERLAEL--RQHPRDHADLLELYLCCLHLGLEGvyr-lrgPE-RLESLKSDLREQVQk 156 Ectothiorhodosp...
Q88IA7        96 rHFELQPLQFRYFGVHLAGEGFFEKVDAL--RADVKQNIDVLEVYHLCLALGFEGkfs-lgqKD-QLRYLANTLGQDIAr 171 Pseudomonas put...
WP_025414345  98 aDWARRPLQEELFGVHMAGEWIFQNVEQLlaRPDTPALADLLEIHQLVFLLGFKGryg-aadPA-ALHAYTSRVADRVGr 175 Gemmatirosa kal...
WP_015895675  88 aEWARRPLQDELFGGHMGGEWFFQHIDQLlaRPDSVELAELLEVYQLCLLLGFRGkfg-agdNG-QLYAITTKVAERLSr 165 Gemmatimonas au...
WP_013572718  95 aDWSRRPLQEEMFGGHFAGETFFRQVADLlnAPESTEVADTLELHAICLLLGYRGkya-fgeGG-EISGILSRIRDKIIr 172 Granulicella tu...
WP_013567642  85 aDWAGRPLQEELFGGHLAGEAFFQNLRTClgQQDSSEVADVLEIHCLCLLIGYRGrya-lgdSG-ELHALLRQARERIRr 162 Terriglobus saa...
WP_014266062  98 aDWARRPMQEELFGGHVAGETFFQNFAALlrEENSTKVADVLELHCHCLMLGYKGrya-fgnAG-ELAQLLRAAQEKIVr 175 Granulicella ma...
Q7VJJ2       105 sHFAKHTLTIRLFDEMLGGDKFYGIANQW--LLTPSKHKDMLEFIYTCLILGYQGkyasdtqGKQKINHLCCNIANSLAp 182 Helicobacter he...
7THW_D       161 --GQDATQsLAIAQAvKGSPRRQYIka-----------lKIFT 190 Yersinia pestis CO92
WP_013659972 206 ----AQGRsFSESERlPLLVSDIAeypkvikpkkpvrlwRSFA 244 Marinomonas mediterranea
WP_025280152 157 lqESDD----DPTTAaSLAGKNTRYrsrp------vplsIRGI 189 Ectothiorhodospira haloalkaliphila
Q88IA7       172 yrKAPK-A-LSPDWAlPDQVSQMLrhev--------plwVYLA 204 Pseudomonas putida KT2440
WP_025414345 176 lrGVPG-D-LAPSWRpGADAVLGRdrwi-------rplaLGVA 209 Gemmatirosa kalamazoonensis
WP_015895675 166 lrRVGG-D-LAPHWQpPADRVDARdpwl-------rplaMAAI 199 Gemmatimonas aurantiaca
WP_013572718 173 irGPLALA--RLSAVpEVKIVAKRdkwl-------tslyLAAA 206 Granulicella tundricola
WP_013567642 163 irGDAHLG-LRPNSVpPALAIPTSdtwt-------rrlaWTVC 197 Terriglobus saanensis
WP_014266062 176 arGGAGTL-LPGPATlPQPAATGRdrws-------yrlmIAAM 210 Granulicella mallensis
Q7VJJ2       183 amGSSEGKaFELALNhqeqtrilkl----lhkkylrpfwLMAI 221 Helicobacter hepaticus
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